Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SNRPGP15-201ENST00000600149 222 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 RPL7P50-201ENST00000600588 727 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 AP002360.3-201ENST00000607673 710 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 OR6R2P-201ENST00000609216 300 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 AC136475.10-201ENST00000620253 385 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 AC005086.4-201ENST00000623065 213 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNGA1P29973 AC099654.12-201ENST00000639868 649 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNGA1P29973 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNGA1P29973 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
CNGA1P29973 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNGA1P29973 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.9□□□□□ -1.63
CNGA1P29973 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.89□□□□□ -1.63
CNGA1P29973 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.89□□□□□ -1.63
CNGA1P29973 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNGA1P29973 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.89□□□□□ -1.63
CNGA1P29973 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNGA1P29973 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNGA1P29973 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNGA1P29973 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CNGA1P29973 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CNGA1P29973 RNU1-108P-201ENST00000362556 161 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 RN7SKP226-201ENST00000364912 300 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.89□□□□□ -1.63
CNGA1P29973 RNU1-63P-201ENST00000383902 164 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 MIR200C-201ENST00000384980 68 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 MIR195-201ENST00000385194 87 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 SNORD96B-201ENST00000386148 79 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 RNU6ATAC-201ENST00000408749 126 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 VDAC1P9-201ENST00000412766 841 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.89□□□□□ -1.63
CNGA1P29973 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.89□□□□□ -1.63
CNGA1P29973 ISCA1P6-201ENST00000427740 390 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.89□□□□□ -1.63
CNGA1P29973 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.89□□□□□ -1.63
CNGA1P29973 GOT2P5-201ENST00000433995 546 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 AC007389.2-201ENST00000434630 306 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.89□□□□□ -1.63
CNGA1P29973 TIMM9P1-201ENST00000436122 256 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 USP9YP7-201ENST00000436723 430 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 AC069285.2-201ENST00000440210 275 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 AL512326.1-201ENST00000443050 721 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.89□□□□□ -1.63
CNGA1P29973 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.89□□□□□ -1.63
CNGA1P29973 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.89□□□□□ -1.63
CNGA1P29973 USP9YP32-201ENST00000452432 430 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 MTND1P12-201ENST00000455231 147 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 SRRM1P2-201ENST00000464531 1192 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 RPL35AP15-201ENST00000468042 339 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 TMED11P-201ENST00000479478 690 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 RPL9P33-201ENST00000484311 566 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 AC093278.1-201ENST00000494700 600 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 KCTD9P5-201ENST00000504141 1170 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CNGA1P29973 AC010460.1-201ENST00000507087 466 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNGA1P29973 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CNGA1P29973 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.89□□□□□ -1.63
CNGA1P29973 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CNGA1P29973 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.89□□□□□ -1.63
CNGA1P29973 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.89□□□□□ -1.63
CNGA1P29973 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.89□□□□□ -1.63
CNGA1P29973 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.89□□□□□ -1.63
CNGA1P29973 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.89□□□□□ -1.63
CNGA1P29973 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.89□□□□□ -1.63
CNGA1P29973 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.89□□□□□ -1.63
CNGA1P29973 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.89□□□□□ -1.63
CNGA1P29973 AL354984.3-201ENST00000604803 325 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.89□□□□□ -1.63
CNGA1P29973 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.89□□□□□ -1.63
CNGA1P29973 AC004908.2-201ENST00000609090 574 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 AC140113.4-201ENST00000622087 222 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 AL732618.1-201ENST00000623251 301 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 AL365440.1-201ENST00000436135 2167 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNGA1P29973 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.89□□□□□ -1.63
CNGA1P29973 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CNGA1P29973 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNGA1P29973 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.89□□□□□ -1.63
CNGA1P29973 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.89□□□□□ -1.63
CNGA1P29973 EOGT-210ENST00000615922 1931 ntBASIC4.89□□□□□ -1.63
CNGA1P29973 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CNGA1P29973 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNGA1P29973 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.89□□□□□ -1.63
CNGA1P29973 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CNGA1P29973 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNGA1P29973 AC024560.2-201ENST00000507981 1497 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNGA1P29973 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CNGA1P29973 AC068254.2-201ENST00000623938 3577 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 AC010733.2-201ENST00000589496 5702 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CNGA1P29973 MIR448-201ENST00000362131 111 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 RNU5E-1-201ENST00000362477 120 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 RNU1-14P-201ENST00000362759 152 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 RNY4P16-201ENST00000364768 94 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 RNA5SP44-201ENST00000410446 133 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 ELOCP17-201ENST00000414751 326 ntBASIC4.88□□□□□ -1.63
CNGA1P29973 RAD23BP2-201ENST00000416003 1207 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms