Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC007677.1-201ENST00000445757 515 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.43□□□□□ -1.7
POLR2AP24928 RPL21P11-201ENST00000461458 483 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 AC015724.1-201ENST00000478577 156 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 AC012123.2-201ENST00000485809 248 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 RNU6-1261P-201ENST00000517194 104 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.43□□□□□ -1.7
POLR2AP24928 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.43□□□□□ -1.7
POLR2AP24928 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.43□□□□□ -1.7
POLR2AP24928 AC090312.2-201ENST00000582687 378 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 VN1R79P-201ENST00000593540 513 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 Y_RNA.804-201ENST00000615262 101 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.43□□□□□ -1.7
POLR2AP24928 AC093591.3-201ENST00000634516 308 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.43□□□□□ -1.7
POLR2AP24928 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
POLR2AP24928 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.43□□□□□ -1.7
POLR2AP24928 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.43□□□□□ -1.7
POLR2AP24928 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
POLR2AP24928 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
POLR2AP24928 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.43□□□□□ -1.7
POLR2AP24928 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
POLR2AP24928 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.43□□□□□ -1.7
POLR2AP24928 AC009229.4-201ENST00000623854 1947 ntBASIC4.43□□□□□ -1.7
POLR2AP24928 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
POLR2AP24928 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
POLR2AP24928 AL512646.1-201ENST00000269395 1077 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 AL513185.2-201ENST00000425543 193 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AC005019.1-201ENST00000436455 431 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 RPL23AP20-201ENST00000447965 421 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 ARPC3P2-201ENST00000457786 533 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 RPL7P23-201ENST00000493874 747 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AC106872.3-201ENST00000495104 446 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 RPL7L1P13-201ENST00000511702 739 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 AF235103.2-201ENST00000525753 346 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
POLR2AP24928 AC125611.2-201ENST00000551907 647 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AC099489.2-201ENST00000574976 260 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AC009977.1-201ENST00000586015 570 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 CKS1BP3-201ENST00000600888 237 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AL160413.1-201ENST00000622780 310 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AC112204.3-201ENST00000623822 332 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.42□□□□□ -1.7
POLR2AP24928 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
POLR2AP24928 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
POLR2AP24928 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.42□□□□□ -1.7
POLR2AP24928 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
POLR2AP24928 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
POLR2AP24928 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
POLR2AP24928 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
POLR2AP24928 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
POLR2AP24928 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
POLR2AP24928 FRG1BP-201ENST00000278882 761 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 FRG1CP-201ENST00000358464 769 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
POLR2AP24928 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
POLR2AP24928 RNU6-492P-201ENST00000363035 104 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 RNU6-317P-201ENST00000384031 107 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 RNU6-116P-201ENST00000384042 109 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 RNU6-225P-201ENST00000384613 103 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
POLR2AP24928 RNU2-6P-201ENST00000411404 190 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.42□□□□□ -1.7
POLR2AP24928 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.42□□□□□ -1.7
POLR2AP24928 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.42□□□□□ -1.7
POLR2AP24928 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AC002486.1-201ENST00000435098 391 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AC104850.1-201ENST00000435940 476 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 RPS7P5-201ENST00000441482 581 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AL022238.1-201ENST00000442557 355 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 BTF3P5-201ENST00000457252 467 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.42□□□□□ -1.7
POLR2AP24928 AC025518.1-201ENST00000479856 347 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.42□□□□□ -1.7
POLR2AP24928 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.42□□□□□ -1.7
POLR2AP24928 AC007424.1-203ENST00000554613 687 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.42□□□□□ -1.7
POLR2AP24928 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.42□□□□□ -1.7
POLR2AP24928 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.42□□□□□ -1.7
POLR2AP24928 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.42□□□□□ -1.7
POLR2AP24928 AC068790.5-201ENST00000602741 355 ntBASIC4.42□□□□□ -1.7
POLR2AP24928 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
POLR2AP24928 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
POLR2AP24928 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
POLR2AP24928 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR2AP24928 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
POLR2AP24928 RNU6-297P-201ENST00000384636 107 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms