Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC068880.4-201ENST00000623082 495 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AC090617.9-201ENST00000623751 147 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AP003485.1-201ENST00000625093 753 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.35□□□□□ -2.03
COL5A1P20908 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.35□□□□□ -2.03
COL5A1P20908 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.35□□□□□ -2.03
COL5A1P20908 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.35□□□□□ -2.03
COL5A1P20908 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.35□□□□□ -2.03
COL5A1P20908 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.34□□□□□ -2.03
COL5A1P20908 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
COL5A1P20908 AC011155.1-201ENST00000316512 456 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 MIR16-2-201ENST00000362117 81 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 RNU6-252P-201ENST00000363232 107 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.34□□□□□ -2.03
COL5A1P20908 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.34□□□□□ -2.03
COL5A1P20908 RNU6-1257P-201ENST00000384625 110 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 RNU6-1000P-201ENST00000391066 106 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 RN7SKP140-201ENST00000411196 284 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 AL445183.3-201ENST00000414168 502 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 ARL2BPP3-201ENST00000421226 480 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 AL606495.1-201ENST00000422100 813 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.34□□□□□ -2.03
COL5A1P20908 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.34□□□□□ -2.03
COL5A1P20908 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.34□□□□□ -2.03
COL5A1P20908 AC009414.1-201ENST00000427200 443 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 MTND2P2-201ENST00000434633 945 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.34□□□□□ -2.03
COL5A1P20908 MUPP-201ENST00000438111 566 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.34□□□□□ -2.03
COL5A1P20908 RPL7P31-201ENST00000450192 724 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 CLIC4P1-201ENST00000453177 535 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.34□□□□□ -2.03
COL5A1P20908 RPL21P47-201ENST00000483696 477 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 OR9N1P-202ENST00000494289 481 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.34□□□□□ -2.03
COL5A1P20908 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.34□□□□□ -2.03
COL5A1P20908 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.34□□□□□ -2.03
COL5A1P20908 SNORA31.1-201ENST00000515993 133 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 SNORA31.5-201ENST00000516190 133 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.34□□□□□ -2.03
COL5A1P20908 HMGB1P46-201ENST00000520062 610 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 CIR1P1-201ENST00000524055 1133 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 AC128657.1-201ENST00000549459 145 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.34□□□□□ -2.03
COL5A1P20908 AC023825.1-201ENST00000566704 1030 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 MIR4512-201ENST00000583257 77 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 MIR4506-201ENST00000584693 77 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 AL606834.3-201ENST00000602615 496 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 AC004241.3-201ENST00000611728 517 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 XIST_intron.1-201ENST00000619444 68 ntBASIC2.34□□□□□ -2.03
COL5A1P20908 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL5A1P20908 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
COL5A1P20908 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
COL5A1P20908 SNORD115-48-201ENST00000364764 76 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
COL5A1P20908 AC069282.1-201ENST00000411911 526 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 RPL23AP36-201ENST00000413895 458 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.33□□□□□ -2.04
COL5A1P20908 MTCO2P1-201ENST00000424648 477 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.33□□□□□ -2.04
COL5A1P20908 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.33□□□□□ -2.04
COL5A1P20908 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.33□□□□□ -2.04
COL5A1P20908 AC004854.1-201ENST00000440356 349 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AL353093.1-201ENST00000441292 436 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
COL5A1P20908 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.33□□□□□ -2.04
COL5A1P20908 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.33□□□□□ -2.04
COL5A1P20908 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.33□□□□□ -2.04
COL5A1P20908 RNA5SP385-201ENST00000515947 110 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.33□□□□□ -2.04
COL5A1P20908 AC021451.1-201ENST00000523498 1129 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.33□□□□□ -2.04
COL5A1P20908 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.33□□□□□ -2.04
COL5A1P20908 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.33□□□□□ -2.04
COL5A1P20908 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.33□□□□□ -2.04
COL5A1P20908 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.33□□□□□ -2.04
COL5A1P20908 MIR4498-201ENST00000577599 66 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 RNU6-1192P-201ENST00000612197 107 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AL050303.3-201ENST00000613704 284 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 VN1R9P-201ENST00000614184 867 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 RNU6-489P-201ENST00000618289 107 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 RMST_5.1-201ENST00000618704 126 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.33□□□□□ -2.04
COL5A1P20908 MIR6873-201ENST00000622788 63 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC068787.1-201ENST00000623908 691 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AL109659.3-201ENST00000624985 950 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC013437.2-201ENST00000639587 677 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.33□□□□□ -2.04
COL5A1P20908 MTCO1P14-201ENST00000441695 1559 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.33□□□□□ -2.04
COL5A1P20908 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL5A1P20908 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
COL5A1P20908 MTCO2P17-201ENST00000424336 677 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 MTCO2P23-201ENST00000425216 680 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.33□□□□□ -2.04
COL5A1P20908 HMGB3P21-201ENST00000452483 547 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 RPL32P14-201ENST00000463196 378 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 AC008379.1-201ENST00000463655 464 ntBASIC2.33□□□□□ -2.04
COL5A1P20908 VN1R17P-201ENST00000472048 1090 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms