Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
HLA-DPA1P20036 CR383658.2-201ENST00000547576 1525 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 RPL23AP57-201ENST00000332361 466 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 CD24P4-201ENST00000382840 243 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 RNA5SP252-201ENST00000391131 119 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 RNA5SP80-201ENST00000410475 111 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 TPMTP2-201ENST00000414372 726 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 RPL7P46-201ENST00000425129 740 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 RPL26P6-201ENST00000440913 438 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 MTCO1P53-201ENST00000441633 699 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AC004801.2-202ENST00000463559 283 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AC010401.1-201ENST00000463867 348 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AC011979.1-201ENST00000472300 483 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 APOOP4-201ENST00000513530 597 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AC093677.1-201ENST00000514414 678 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AC093331.1-201ENST00000521474 169 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AC011602.1-201ENST00000546484 331 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 MIR5186-201ENST00000577504 120 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 BNIP3P26-201ENST00000600827 554 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AL590099.1-201ENST00000615276 138 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 SNORD39.4-201ENST00000620099 78 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AL356321.1-201ENST00000621360 228 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AC090772.4-201ENST00000623599 362 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AC004777.1-201ENST00000624317 287 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 AC103988.1-201ENST00000566382 2177 ntBASIC3.39□□□□□ -1.87
HLA-DPA1P20036 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.39□□□□□ -1.87
HLA-DPA1P20036 MAPK10-362ENST00000641864 4484 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AL079343.1-201ENST00000572358 1771 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AP002088.1-201ENST00000382740 395 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 RNU6-1197P-201ENST00000391183 107 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 TIMM9P2-201ENST00000419324 266 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AL159987.2-201ENST00000432754 307 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC092573.2-201ENST00000434546 243 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 TXNP1-201ENST00000441872 371 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 MTCO2P25-201ENST00000447065 681 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 PRDX3P3-201ENST00000447765 522 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 RPL26P28-201ENST00000451325 435 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC006539.3-201ENST00000454258 129 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC006483.1-201ENST00000487308 313 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC093663.1-201ENST00000497190 394 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 RPL21P131-201ENST00000497298 483 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC006445.2-201ENST00000510061 472 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC006499.2-201ENST00000513470 337 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 FABP5P12-201ENST00000515543 389 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 RNY4P37-201ENST00000516225 96 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC007458.1-201ENST00000542812 373 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC005476.1-201ENST00000554427 397 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC015917.1-201ENST00000579654 510 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC004987.4-201ENST00000603383 338 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AL158050.2-201ENST00000605336 568 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AL450472.3-201ENST00000615578 367 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AL355365.1-201ENST00000616480 294 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AC091046.2-201ENST00000620775 665 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 AP003122.6-201ENST00000623831 495 ntBASIC3.38□□□□□ -1.87
HLA-DPA1P20036 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.38□□□□□ -1.87
HLA-DPA1P20036 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DPA1P20036 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DPA1P20036 AC007496.3-201ENST00000624987 3443 ntBASIC3.37□□□□□ -1.87
HLA-DPA1P20036 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DPA1P20036 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HLA-DPA1P20036 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DPA1P20036 NACA3P-201ENST00000359690 648 ntBASIC3.37□□□□□ -1.87
HLA-DPA1P20036 RNA5SP72-201ENST00000364442 117 ntBASIC3.37□□□□□ -1.87
HLA-DPA1P20036 RNU6-413P-201ENST00000384115 107 ntBASIC3.37□□□□□ -1.87
HLA-DPA1P20036 MIR490-201ENST00000384865 128 ntBASIC3.37□□□□□ -1.87
HLA-DPA1P20036 MIR1290-201ENST00000408735 78 ntBASIC3.37□□□□□ -1.87
HLA-DPA1P20036 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms