Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DOBP13765 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DOBP13765 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DOBP13765 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DOBP13765 MTND5P26-201ENST00000426018 1752 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DOBP13765 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DOBP13765 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DOBP13765 RNA5SP283-201ENST00000365604 119 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 MIR153-1-201ENST00000384914 90 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 SPA17P1-201ENST00000416656 452 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 C1DP2-201ENST00000418167 426 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AL391219.1-201ENST00000422570 483 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC005517.2-201ENST00000424673 553 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC098824.1-201ENST00000453565 980 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC093899.1-201ENST00000457984 376 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC146507.1-201ENST00000468335 354 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 RN7SL385P-201ENST00000468873 276 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 RPL21P103-201ENST00000479921 488 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AL358832.1-201ENST00000497800 389 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC107401.1-201ENST00000503426 685 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 TMEM248P1-201ENST00000510579 951 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 RNU6-27P-201ENST00000516146 107 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 RN7SKP116-201ENST00000516902 319 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 MTCO2P4-201ENST00000517968 247 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AP003385.6-201ENST00000531603 374 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 EEF1B2P4-201ENST00000551398 348 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 SETP2-201ENST00000553886 926 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 PARP1P2-201ENST00000556806 195 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AL157394.1-201ENST00000562983 1224 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC009101.1-201ENST00000568135 242 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC120057.2-201ENST00000571520 271 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 MTATP6P3-201ENST00000581686 676 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC011468.4-201ENST00000603942 409 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AL022154.1-201ENST00000604698 785 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC004853.1-201ENST00000604902 698 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AL365503.1-201ENST00000605247 905 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC010680.4-201ENST00000605334 543 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC098614.4-201ENST00000607601 462 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 OR10AB1P-201ENST00000609613 938 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC006329.2-201ENST00000611491 394 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC026368.1-201ENST00000614934 690 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 RNA5SP196-201ENST00000625967 102 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 PISRT1-201ENST00000626175 531 ntBASIC3.48□□□□□ -1.85
HLA-DOBP13765 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DOBP13765 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
HLA-DOBP13765 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DOBP13765 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DOBP13765 AC095050.2-201ENST00000510748 1458 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DOBP13765 AC092125.1-201ENST00000562568 1995 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 BDP1P-201ENST00000582658 1990 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HLA-DOBP13765 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
HLA-DOBP13765 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DOBP13765 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DOBP13765 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DOBP13765 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DOBP13765 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HLA-DOBP13765 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DOBP13765 RNU6-356P-201ENST00000384140 107 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 MIR708-201ENST00000390708 88 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 RNA5SP56-201ENST00000410277 118 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DOBP13765 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DOBP13765 RAC1P3-201ENST00000416129 580 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 AC127526.1-201ENST00000417526 366 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 MTCYBP24-201ENST00000420387 1106 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 AL353777.1-201ENST00000425552 326 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DOBP13765 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DOBP13765 AC009961.2-201ENST00000435771 251 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 RPL23AP33-201ENST00000442301 452 ntBASIC3.47□□□□□ -1.85
HLA-DOBP13765 RPL17P49-201ENST00000443728 411 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms