Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC108078.2-201ENST00000510750 236 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 AC098976.1-201ENST00000513014 541 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 RNU6-64P-201ENST00000517119 105 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 AC027369.5-201ENST00000533838 755 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXD8P13378 AC026470.2-201ENST00000561492 181 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXD8P13378 AC005357.1-201ENST00000588399 301 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 AP001486.3-201ENST00000615334 372 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXD8P13378 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXD8P13378 AL732372.2-225ENST00000642124 456 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD8P13378 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HOXD8P13378 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD8P13378 ZNF734P-201ENST00000419494 1534 ntBASIC5.58□□□□□ -1.52
HOXD8P13378 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXD8P13378 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXD8P13378 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXD8P13378 AC097063.1-201ENST00000426714 1797 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HOXD8P13378 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HOXD8P13378 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD8P13378 AC099654.2-201ENST00000433031 1980 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 Y_RNA.80-201ENST00000362996 102 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 RNU5E-6P-201ENST00000365574 115 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 OR1L6-202ENST00000373684 1044 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 RNU6-432P-201ENST00000384196 109 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 RNU4-70P-201ENST00000384579 139 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 RNU6-550P-201ENST00000391057 101 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 RNU4-6P-201ENST00000410804 122 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 RNA5SP107-201ENST00000411358 122 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AC016696.1-201ENST00000446949 318 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AURKAPS2-201ENST00000454983 333 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AC116533.1-201ENST00000459748 321 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 RPS20P21-201ENST00000466859 343 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AC006967.1-201ENST00000467608 589 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AC010655.3-201ENST00000478818 450 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AC092451.1-201ENST00000480211 153 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AC008897.1-201ENST00000494006 347 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AC116337.1-201ENST00000509680 687 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AC107222.1-201ENST00000510899 637 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AP006289.1-201ENST00000538089 277 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AC092470.1-201ENST00000546187 132 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD8P13378 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXD8P13378 U2.17-201ENST00000611454 95 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AL138726.1-201ENST00000614873 333 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 AC103705.1-201ENST00000619013 241 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXD8P13378 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD8P13378 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXD8P13378 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 AP005432.1-201ENST00000580891 3485 ntBASIC5.57□□□□□ -1.52
HOXD8P13378 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXD8P13378 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HOXD8P13378 AC125336.1-201ENST00000508893 2827 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 GABPAP-201ENST00000419271 1356 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD8P13378 MIR133A2-201ENST00000347538 102 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 RNA5SP191-201ENST00000362585 102 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HOXD8P13378 RNU2-3P-201ENST00000410144 191 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 RN7SKP159-201ENST00000410657 292 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 RNU6-387P-201ENST00000411331 105 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXD8P13378 COX6CP13-201ENST00000428703 226 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 NRBF2P3-201ENST00000432731 865 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 AC127537.2-201ENST00000439258 465 ntBASIC5.56□□□□□ -1.52
HOXD8P13378 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms