Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC025881.1-201ENST00000518851 512 ntBASIC2.36□□□□□ -2.03
COL11A1P12107 AP000889.2-201ENST00000532684 490 ntBASIC2.36□□□□□ -2.03
COL11A1P12107 MTND4LP24-201ENST00000572277 291 ntBASIC2.36□□□□□ -2.03
COL11A1P12107 AL356575.1-201ENST00000603008 283 ntBASIC2.36□□□□□ -2.03
COL11A1P12107 AL022099.1-201ENST00000604551 712 ntBASIC2.36□□□□□ -2.03
COL11A1P12107 RNA5SP108-201ENST00000605921 117 ntBASIC2.36□□□□□ -2.03
COL11A1P12107 AC117490.2-201ENST00000610042 594 ntBASIC2.36□□□□□ -2.03
COL11A1P12107 AP003072.4-201ENST00000624580 310 ntBASIC2.36□□□□□ -2.03
COL11A1P12107 MIR4278-201ENST00000636094 69 ntBASIC2.36□□□□□ -2.03
COL11A1P12107 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
COL11A1P12107 SEPT7P7-201ENST00000420492 1301 ntBASIC2.36□□□□□ -2.03
COL11A1P12107 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL11A1P12107 Y_RNA.40-201ENST00000362645 93 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 SNORD65-201ENST00000391079 73 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.35□□□□□ -2.03
COL11A1P12107 RAD23BP2-201ENST00000416003 1207 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.35□□□□□ -2.03
COL11A1P12107 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.35□□□□□ -2.03
COL11A1P12107 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.35□□□□□ -2.03
COL11A1P12107 AC092754.2-201ENST00000463506 460 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.35□□□□□ -2.03
COL11A1P12107 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.35□□□□□ -2.03
COL11A1P12107 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.35□□□□□ -2.03
COL11A1P12107 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.35□□□□□ -2.03
COL11A1P12107 AC121761.2-201ENST00000617300 689 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 RMST_5.1-201ENST00000618704 126 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AC116563.2-201ENST00000624751 535 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.35□□□□□ -2.03
COL11A1P12107 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL11A1P12107 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.35□□□□□ -2.03
COL11A1P12107 AL512283.1-201ENST00000606756 1384 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AC244453.4-201ENST00000419150 388 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AC092832.1-201ENST00000422934 400 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AL590623.1-201ENST00000427864 105 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 ATP5F1P1-201ENST00000433775 569 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.35□□□□□ -2.03
COL11A1P12107 AL353898.1-201ENST00000444055 238 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 CBWD4P-201ENST00000445695 655 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 RAD1P2-201ENST00000446414 663 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.35□□□□□ -2.03
COL11A1P12107 RPL23AP70-201ENST00000483361 460 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 MTND3P6-201ENST00000485242 339 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AC005912.1-201ENST00000495392 255 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.35□□□□□ -2.03
COL11A1P12107 RNU6-362P-201ENST00000516736 90 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 OR6C73P-201ENST00000546432 358 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.35□□□□□ -2.03
COL11A1P12107 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.35□□□□□ -2.03
COL11A1P12107 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.35□□□□□ -2.03
COL11A1P12107 AC005951.1-201ENST00000576706 485 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.35□□□□□ -2.03
COL11A1P12107 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.35□□□□□ -2.03
COL11A1P12107 MIR8070-201ENST00000616510 88 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 AL590410.1-201ENST00000617925 333 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 YWHAEP7-203ENST00000622054 312 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL11A1P12107 NSRP1P1-201ENST00000444067 1693 ntBASIC2.35□□□□□ -2.03
COL11A1P12107 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL11A1P12107 MTND5P28-201ENST00000438005 1594 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 SNORA40.18-201ENST00000391200 128 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 AL450338.1-201ENST00000407987 512 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 SPA17P1-201ENST00000416656 452 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 AL445685.2-201ENST00000422551 342 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 ELOCP6-201ENST00000429066 328 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 AL445646.1-201ENST00000431784 216 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.34□□□□□ -2.03
COL11A1P12107 TPMTP4-201ENST00000450749 678 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 AL445669.2-201ENST00000454425 421 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 ELOCP12-201ENST00000458706 328 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 GTF2IP9-201ENST00000502460 301 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.34□□□□□ -2.03
COL11A1P12107 MTND5P4-201ENST00000514978 288 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 PTP4A1P6-201ENST00000531034 478 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 OR4U1P-201ENST00000554958 912 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 AL353997.5-201ENST00000618886 171 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 MIR6132-201ENST00000622083 109 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 DCAF13P3-201ENST00000561147 1334 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 AP001486.2-201ENST00000561652 5113 ntBASIC2.34□□□□□ -2.03
COL11A1P12107 AL359715.4-201ENST00000606629 1436 ntBASIC2.34□□□□□ -2.04
COL11A1P12107 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.34□□□□□ -2.04
COL11A1P12107 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.34□□□□□ -2.04
COL11A1P12107 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL11A1P12107 RNU4-23P-201ENST00000362839 140 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL11A1P12107 MTND3P20-201ENST00000407663 186 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 RNA5SP181-201ENST00000410246 98 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 AC008173.1-201ENST00000418901 264 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.33□□□□□ -2.04
COL11A1P12107 RPL23AP33-201ENST00000442301 452 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 AC124916.1-201ENST00000444020 547 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 AC146507.1-201ENST00000468335 354 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.33□□□□□ -2.04
COL11A1P12107 AP000787.2-201ENST00000604432 568 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 AC012467.1-201ENST00000607740 256 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 AC091834.1-201ENST00000614543 472 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL11A1P12107 AC011460.1-201ENST00000636268 1834 ntBASIC2.33□□□□□ -2.04
COL11A1P12107 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
COL11A1P12107 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms