Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 OR1S1-201ENST00000624470 978 ntBASIC3.11□□□□□ -1.91
TOP2AP11388 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TOP2AP11388 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TOP2AP11388 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.1□□□□□ -1.91
TOP2AP11388 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.1□□□□□ -1.91
TOP2AP11388 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.1□□□□□ -1.91
TOP2AP11388 AC108078.2-201ENST00000510750 236 ntBASIC3.1□□□□□ -1.91
TOP2AP11388 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.1□□□□□ -1.91
TOP2AP11388 MTCO1P6-201ENST00000481192 1384 ntBASIC3.1□□□□□ -1.91
TOP2AP11388 CKAP2P1-201ENST00000555477 2049 ntBASIC3.1□□□□□ -1.91
TOP2AP11388 AC012321.1-201ENST00000561622 1588 ntBASIC3.1□□□□□ -1.91
TOP2AP11388 AP001486.2-201ENST00000561652 5113 ntBASIC3.1□□□□□ -1.91
TOP2AP11388 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TOP2AP11388 UBE2L2-201ENST00000254302 429 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 FGF7P8-201ENST00000402994 292 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.09□□□□□ -1.91
TOP2AP11388 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.09□□□□□ -1.91
TOP2AP11388 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.09□□□□□ -1.91
TOP2AP11388 AL670379.6-201ENST00000603753 252 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AL670379.11-201ENST00000604059 253 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AL670379.10-201ENST00000604330 253 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AC008162.1-201ENST00000604718 254 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AL670379.1-201ENST00000604752 252 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AL670379.2-201ENST00000604983 252 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AL670379.5-201ENST00000605253 252 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AL670379.4-201ENST00000605279 254 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AL670379.12-201ENST00000605291 253 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AL670379.8-201ENST00000605353 252 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AL670379.9-201ENST00000605428 253 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AL670379.7-201ENST00000605823 252 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AC009570.1-201ENST00000609599 745 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 AC034102.8-201ENST00000615146 484 ntBASIC3.09□□□□□ -1.91
TOP2AP11388 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TOP2AP11388 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TOP2AP11388 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TOP2AP11388 MTND4P13-201ENST00000402078 1023 ntBASIC3.09□□□□□ -1.92
TOP2AP11388 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.09□□□□□ -1.92
TOP2AP11388 AL096701.2-201ENST00000416920 238 ntBASIC3.09□□□□□ -1.92
TOP2AP11388 RPS7P5-201ENST00000441482 581 ntBASIC3.09□□□□□ -1.92
TOP2AP11388 AC090453.1-201ENST00000495560 436 ntBASIC3.09□□□□□ -1.92
TOP2AP11388 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.09□□□□□ -1.92
TOP2AP11388 AC048347.1-201ENST00000624621 427 ntBASIC3.09□□□□□ -1.92
TOP2AP11388 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TOP2AP11388 AC010329.2-201ENST00000595195 2737 ntBASIC3.08□□□□□ -1.92
TOP2AP11388 RNA5SP37-201ENST00000365420 130 ntBASIC3.08□□□□□ -1.92
TOP2AP11388 SETP8-201ENST00000435341 628 ntBASIC3.08□□□□□ -1.92
TOP2AP11388 AL590762.3-201ENST00000436372 640 ntBASIC3.08□□□□□ -1.92
TOP2AP11388 AC005840.1-201ENST00000498412 377 ntBASIC3.08□□□□□ -1.92
TOP2AP11388 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TOP2AP11388 AC034268.2-201ENST00000571784 482 ntBASIC3.08□□□□□ -1.92
TOP2AP11388 AC005951.1-201ENST00000576706 485 ntBASIC3.08□□□□□ -1.92
TOP2AP11388 AL353748.2-201ENST00000622148 471 ntBASIC3.08□□□□□ -1.92
TOP2AP11388 C2orf27A-204ENST00000623058 969 ntBASIC3.08□□□□□ -1.92
TOP2AP11388 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
TOP2AP11388 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.07□□□□□ -1.92
TOP2AP11388 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TOP2AP11388 AC048351.1-201ENST00000420064 602 ntBASIC3.07□□□□□ -1.92
TOP2AP11388 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.07□□□□□ -1.92
TOP2AP11388 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.07□□□□□ -1.92
TOP2AP11388 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.07□□□□□ -1.92
TOP2AP11388 SUB1P3-201ENST00000564581 315 ntBASIC3.07□□□□□ -1.92
TOP2AP11388 AC091046.2-201ENST00000620775 665 ntBASIC3.07□□□□□ -1.92
TOP2AP11388 AC107021.2-201ENST00000567714 2095 ntBASIC3.07□□□□□ -1.92
TOP2AP11388 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.07□□□□□ -1.92
TOP2AP11388 AL592437.2-201ENST00000421655 2434 ntBASIC3.06□□□□□ -1.92
TOP2AP11388 RPL19P1-201ENST00000411635 428 ntBASIC3.06□□□□□ -1.92
TOP2AP11388 Z82209.1-201ENST00000422141 2135 ntBASIC3.06□□□□□ -1.92
TOP2AP11388 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.06□□□□□ -1.92
TOP2AP11388 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TOP2AP11388 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.06□□□□□ -1.92
TOP2AP11388 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.06□□□□□ -1.92
TOP2AP11388 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.06□□□□□ -1.92
TOP2AP11388 AC009452.1-201ENST00000640823 606 ntBASIC3.06□□□□□ -1.92
TOP2AP11388 AC005336.3-201ENST00000623833 2679 ntBASIC3.05□□□□□ -1.92
TOP2AP11388 RNA5SP27-201ENST00000363839 119 ntBASIC3.05□□□□□ -1.92
TOP2AP11388 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
TOP2AP11388 TOMM22P1-201ENST00000418578 312 ntBASIC3.05□□□□□ -1.92
TOP2AP11388 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.05□□□□□ -1.92
TOP2AP11388 AC025881.1-201ENST00000518851 512 ntBASIC3.05□□□□□ -1.92
TOP2AP11388 AC010546.1-201ENST00000569391 485 ntBASIC3.05□□□□□ -1.92
TOP2AP11388 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.05□□□□□ -1.92
TOP2AP11388 AC131902.3-201ENST00000611767 581 ntBASIC3.05□□□□□ -1.92
TOP2AP11388 AL512643.1-201ENST00000635735 524 ntBASIC3.05□□□□□ -1.92
TOP2AP11388 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TOP2AP11388 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.04□□□□□ -1.92
TOP2AP11388 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.04□□□□□ -1.92
TOP2AP11388 SNORA31.26-201ENST00000517250 137 ntBASIC3.04□□□□□ -1.92
TOP2AP11388 PTP4A1P6-201ENST00000531034 478 ntBASIC3.04□□□□□ -1.92
TOP2AP11388 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.04□□□□□ -1.92
TOP2AP11388 PRELID2P1-201ENST00000552837 301 ntBASIC3.04□□□□□ -1.92
TOP2AP11388 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TOP2AP11388 AL359715.4-201ENST00000606629 1436 ntBASIC3.04□□□□□ -1.92
TOP2AP11388 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TOP2AP11388 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.03□□□□□ -1.92
TOP2AP11388 AC104986.1-201ENST00000517978 436 ntBASIC3.03□□□□□ -1.92
TOP2AP11388 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.03□□□□□ -1.92
TOP2AP11388 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.03□□□□□ -1.92
TOP2AP11388 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TOP2AP11388 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
TOP2AP11388 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms