Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 ANP32BP3-201ENST00000559213 706 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 AL157394.1-201ENST00000562983 1224 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC090616.5-202ENST00000582111 297 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC008739.3-201ENST00000603262 127 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC123786.2-201ENST00000603459 275 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC008536.2-201ENST00000607284 349 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AL773545.4-201ENST00000637262 310 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 U6.101-201ENST00000637707 76 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 LRRC77P-213ENST00000637727 880 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AL513478.4-201ENST00000641636 310 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOAP06340 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 MTND4P12-201ENST00000498999 1377 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DOAP06340 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOAP06340 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DOAP06340 AL022578.1-201ENST00000439330 1433 ntBASIC4.61□□□□□ -1.67
HLA-DOAP06340 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DOAP06340 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DOAP06340 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DOAP06340 Y_RNA.89-201ENST00000363031 102 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 RNU6-534P-201ENST00000364877 106 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AC016769.3-201ENST00000396562 315 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 EIF5P1-201ENST00000400019 1231 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 RAB9AP3-201ENST00000412737 573 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 MTCO1P20-201ENST00000425366 358 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AL589872.1-201ENST00000426602 288 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AL591419.1-201ENST00000427423 339 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 RSU1P2-202ENST00000437884 485 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 MTCO3P18-201ENST00000440206 761 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 MTND5P14-201ENST00000441481 1267 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 RAB9AP1-201ENST00000449393 573 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 MTCO3P2-201ENST00000457365 171 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AC018797.3-201ENST00000513388 1241 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AC104986.1-201ENST00000517978 436 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 AP003181.2-201ENST00000528941 181 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 AC068587.4-201ENST00000533893 186 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 GNRHR2P1-201ENST00000555315 631 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 HMGB1P33-201ENST00000563485 527 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AC053481.3-201ENST00000577881 843 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AC090312.1-201ENST00000580637 348 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 MIR4637-201ENST00000582405 84 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 BNIP3P22-201ENST00000593399 556 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 AL590282.1-201ENST00000610379 1136 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AC012150.2-201ENST00000621300 544 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 AL732618.1-201ENST00000623251 301 ntBASIC4.6□□□□□ -1.67
HLA-DOAP06340 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DOAP06340 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DOAP06340 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
HLA-DOAP06340 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DOAP06340 LINC00561-201ENST00000565815 2738 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DOAP06340 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DOAP06340 OR5J1P-201ENST00000313544 939 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DOAP06340 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DOAP06340 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 RNU6-483P-201ENST00000384088 108 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 MIR649-201ENST00000384843 97 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 MIR449B-201ENST00000384995 97 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 SPA17P1-201ENST00000416656 452 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 RPS3AP9-201ENST00000417027 792 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AL031736.2-201ENST00000426573 787 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 RABEPKP1-201ENST00000440529 1026 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 AL358232.1-201ENST00000448030 501 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DOAP06340 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.59□□□□□ -1.67
HLA-DOAP06340 AC106872.3-201ENST00000495104 446 ntBASIC4.59□□□□□ -1.67
HLA-DOAP06340 RPL30P11-201ENST00000495304 339 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms