Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.75□□□□□ -2.13
ABCA1O95477 AP001180.3-201ENST00000582221 145 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AC016252.1-201ENST00000609721 474 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AL137847.3-201ENST00000611521 109 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AL589935.2-201ENST00000616471 1231 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ABCA1O95477 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.75□□□□□ -2.13
ABCA1O95477 MTND4P34-201ENST00000572715 1371 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ABCA1O95477 AC004925.1-201ENST00000624256 2706 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AL512646.1-201ENST00000269395 1077 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC1.75□□□□□ -2.13
ABCA1O95477 RNU6-532P-201ENST00000384318 107 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 MT-TP-201ENST00000387461 68 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 MIR320B1-201ENST00000390209 79 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ABCA1O95477 MTND2P16-201ENST00000419987 799 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.75□□□□□ -2.13
ABCA1O95477 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.75□□□□□ -2.13
ABCA1O95477 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.75□□□□□ -2.13
ABCA1O95477 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.75□□□□□ -2.13
ABCA1O95477 MTND4LP22-201ENST00000508209 276 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.75□□□□□ -2.13
ABCA1O95477 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.75□□□□□ -2.13
ABCA1O95477 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.75□□□□□ -2.13
ABCA1O95477 AC096656.1-201ENST00000623826 1364 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
ABCA1O95477 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.74□□□□□ -2.13
ABCA1O95477 RNY1P10-201ENST00000363268 113 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 SNORA48.3-201ENST00000391081 134 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.74□□□□□ -2.13
ABCA1O95477 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ABCA1O95477 OR6C73P-201ENST00000546432 358 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ABCA1O95477 AL160237.3-201ENST00000604114 1013 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 AC073387.2-201ENST00000604797 784 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 AP003117.2-201ENST00000606010 545 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 AC009570.1-201ENST00000609599 745 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 CU459211.1-201ENST00000635667 749 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
ABCA1O95477 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
ABCA1O95477 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
ABCA1O95477 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
ABCA1O95477 Y_RNA.116-201ENST00000363292 103 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 RNU1-138P-201ENST00000384093 164 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 MTND4P13-201ENST00000402078 1023 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 RNU6-1140P-201ENST00000410517 106 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 RNA5SP498-201ENST00000411342 120 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 AL445646.1-201ENST00000431784 216 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.74□□□□□ -2.13
ABCA1O95477 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.74□□□□□ -2.13
ABCA1O95477 RNA5SP200-201ENST00000516360 103 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.74□□□□□ -2.13
ABCA1O95477 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.74□□□□□ -2.13
ABCA1O95477 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.74□□□□□ -2.13
ABCA1O95477 AC025281.1-201ENST00000567026 265 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 MIR548Y-201ENST00000582739 110 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.74□□□□□ -2.13
ABCA1O95477 AC007620.3-201ENST00000608131 497 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 Z82209.1-201ENST00000422141 2135 ntBASIC1.74□□□□□ -2.13
ABCA1O95477 MTND5P3-201ENST00000438536 1800 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 AP006437.1-201ENST00000641440 3685 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 MIR378A-201ENST00000362177 66 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 AL139156.1-201ENST00000412785 841 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.73□□□□□ -2.13
ABCA1O95477 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.73□□□□□ -2.13
ABCA1O95477 TPMTP4-201ENST00000450749 678 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.73□□□□□ -2.13
ABCA1O95477 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.73□□□□□ -2.13
ABCA1O95477 MTCO1P42-201ENST00000457379 726 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 MTCYBP14-201ENST00000457471 715 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 AC006483.1-201ENST00000487308 313 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.73□□□□□ -2.13
ABCA1O95477 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.73□□□□□ -2.13
ABCA1O95477 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.73□□□□□ -2.13
ABCA1O95477 RN7SKP82-201ENST00000516786 223 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 RNU4-60P-201ENST00000517239 135 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.73□□□□□ -2.13
ABCA1O95477 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.73□□□□□ -2.13
ABCA1O95477 SNRPGP15-201ENST00000600149 222 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.73□□□□□ -2.13
ABCA1O95477 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.73□□□□□ -2.13
ABCA1O95477 AL512283.1-201ENST00000606756 1384 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ABCA1O95477 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ABCA1O95477 ZNF720P1-201ENST00000562403 1939 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 Z82195.2-201ENST00000612348 18351 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
ABCA1O95477 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ABCA1O95477 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.73□□□□□ -2.13
ABCA1O95477 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
ABCA1O95477 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ABCA1O95477 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ABCA1O95477 RN7SKP226-201ENST00000364912 300 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 RNU2-2P-201ENST00000410396 191 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 RPL23AP39-201ENST00000415533 405 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.73□□□□□ -2.13
ABCA1O95477 AC004263.1-201ENST00000479327 332 ntBASIC1.73□□□□□ -2.13
ABCA1O95477 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms