Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC092832.1-201ENST00000422934 400 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 RBMY1KP-201ENST00000423480 476 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS4BO75351 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 AC002486.1-201ENST00000435098 391 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 HLA-N-201ENST00000437516 135 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 USP9YP15-201ENST00000442391 422 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS4BO75351 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS4BO75351 NUTF2P3-201ENST00000448540 384 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 MTND1P12-201ENST00000455231 147 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS4BO75351 MTCO2P29-201ENST00000465212 189 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 RN7SL303P-201ENST00000469773 251 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS4BO75351 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS4BO75351 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS4BO75351 PARP4P3-201ENST00000510265 317 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS4BO75351 AC005798.1-201ENST00000513715 387 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 HIGD1AP3-201ENST00000515857 278 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 AP001781.1-201ENST00000530977 207 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS4BO75351 AL512310.1-201ENST00000548639 172 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS4BO75351 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS4BO75351 AL355812.1-201ENST00000603215 216 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 AC007363.1-201ENST00000604736 620 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS4BO75351 AC002553.4-201ENST00000616896 331 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VPS4BO75351 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
VPS4BO75351 DUXAP9-208ENST00000622815 614 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 AP006248.2-201ENST00000623309 592 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 AC091925.2-201ENST00000625059 256 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 AC099654.14-201ENST00000638599 341 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS4BO75351 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS4BO75351 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VPS4BO75351 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
VPS4BO75351 ZNF33CP-201ENST00000432492 2030 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS4BO75351 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS4BO75351 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS4BO75351 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS4BO75351 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS4BO75351 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS4BO75351 Y_RNA.159-201ENST00000363674 87 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 Y_RNA.303-201ENST00000364998 94 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
VPS4BO75351 RNA5SP104-201ENST00000410989 118 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS4BO75351 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS4BO75351 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS4BO75351 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS4BO75351 RPS12P10-201ENST00000427031 377 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 AC011998.1-201ENST00000433403 117 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 AC112653.1-201ENST00000443851 386 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 RPS20P24-201ENST00000457473 361 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 snoU109.4-201ENST00000458953 143 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 RPS4XP10-201ENST00000465034 731 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS4BO75351 AC007182.2-201ENST00000489251 402 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS4BO75351 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS4BO75351 AC010587.1-201ENST00000505809 469 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS4BO75351 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS4BO75351 TMEM248P1-201ENST00000510579 951 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS4BO75351 AC074344.1-201ENST00000512823 224 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 Y_RNA.693-201ENST00000516641 110 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 RN7SKP234-201ENST00000517173 224 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS4BO75351 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS4BO75351 IFITM8P-201ENST00000522529 394 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS4BO75351 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS4BO75351 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.3□□□□□ -1.72
VPS4BO75351 AC034105.4-201ENST00000568304 277 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS4BO75351 AC245389.1-201ENST00000605141 529 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 AC015813.4-201ENST00000610469 179 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VPS4BO75351 AC019278.1-201ENST00000623516 479 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS4BO75351 MIR6715B-201ENST00000637172 77 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 MIR1321-201ENST00000637766 79 ntBASIC4.3□□□□□ -1.72
VPS4BO75351 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS4BO75351 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS4BO75351 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
VPS4BO75351 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS4BO75351 NOL8P1-201ENST00000508336 3529 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS4BO75351 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS4BO75351 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS4BO75351 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS4BO75351 AC021146.4-201ENST00000309229 279 ntBASIC4.29□□□□□ -1.72
VPS4BO75351 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS4BO75351 RNVU1-3-201ENST00000364313 161 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms