Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNA5SP104-201ENST00000410989 118 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.27□□□□□ -1.73
PROM1O43490 AL035410.1-201ENST00000427409 427 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.27□□□□□ -1.73
PROM1O43490 MTND4LP16-201ENST00000440828 295 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.27□□□□□ -1.73
PROM1O43490 RPL23AP43-201ENST00000446445 471 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AL136380.1-201ENST00000447970 162 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AC012671.1-201ENST00000451912 203 ntBASIC4.27□□□□□ -1.73
PROM1O43490 snoU13.7-201ENST00000459220 104 ntBASIC4.27□□□□□ -1.73
PROM1O43490 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.27□□□□□ -1.73
PROM1O43490 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.27□□□□□ -1.73
PROM1O43490 TXNP6-201ENST00000510190 310 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.27□□□□□ -1.73
PROM1O43490 AC104057.1-201ENST00000515547 497 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.27□□□□□ -1.73
PROM1O43490 AP000827.1-201ENST00000527814 258 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.27□□□□□ -1.73
PROM1O43490 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PROM1O43490 OR8L1P-201ENST00000534005 955 ntBASIC4.27□□□□□ -1.73
PROM1O43490 RAB11AP2-201ENST00000545905 639 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.27□□□□□ -1.73
PROM1O43490 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.27□□□□□ -1.73
PROM1O43490 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.27□□□□□ -1.73
PROM1O43490 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.27□□□□□ -1.73
PROM1O43490 BNIP3P5-201ENST00000562290 498 ntBASIC4.27□□□□□ -1.73
PROM1O43490 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.27□□□□□ -1.73
PROM1O43490 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.27□□□□□ -1.73
PROM1O43490 AL353997.4-201ENST00000586196 166 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.27□□□□□ -1.73
PROM1O43490 AL162413.1-201ENST00000603198 110 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AC007621.1-201ENST00000604544 437 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AL009028.1-201ENST00000604895 802 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.27□□□□□ -1.73
PROM1O43490 AC093788.1-201ENST00000609356 927 ntBASIC4.27□□□□□ -1.73
PROM1O43490 TUG1_1.1-201ENST00000610654 145 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AC004009.2-201ENST00000623016 728 ntBASIC4.27□□□□□ -1.73
PROM1O43490 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.27□□□□□ -1.73
PROM1O43490 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.27□□□□□ -1.73
PROM1O43490 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PROM1O43490 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PROM1O43490 NXPH1-205ENST00000602349 1953 ntBASIC4.27□□□□□ -1.73
PROM1O43490 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PROM1O43490 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.27□□□□□ -1.73
PROM1O43490 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PROM1O43490 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PROM1O43490 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PROM1O43490 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.26□□□□□ -1.73
PROM1O43490 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PROM1O43490 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.26□□□□□ -1.73
PROM1O43490 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PROM1O43490 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
PROM1O43490 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PROM1O43490 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.26□□□□□ -1.73
PROM1O43490 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PROM1O43490 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PROM1O43490 SNORD56.2-201ENST00000363242 71 ntBASIC4.26□□□□□ -1.73
PROM1O43490 Y_RNA.381-201ENST00000365666 102 ntBASIC4.26□□□□□ -1.73
PROM1O43490 SNORA20.2-201ENST00000383922 131 ntBASIC4.26□□□□□ -1.73
PROM1O43490 U3.22-201ENST00000391120 215 ntBASIC4.26□□□□□ -1.73
PROM1O43490 RPL31P1-201ENST00000398116 372 ntBASIC4.26□□□□□ -1.73
PROM1O43490 BTBD10P2-201ENST00000404779 676 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AL353193.1-201ENST00000421444 268 ntBASIC4.26□□□□□ -1.73
PROM1O43490 CHIAP3-201ENST00000423668 1133 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.26□□□□□ -1.73
PROM1O43490 RPS12P10-201ENST00000427031 377 ntBASIC4.26□□□□□ -1.73
PROM1O43490 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PROM1O43490 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.26□□□□□ -1.73
PROM1O43490 OR4F13P-201ENST00000428478 931 ntBASIC4.26□□□□□ -1.73
PROM1O43490 OR51AB1P-201ENST00000429046 620 ntBASIC4.26□□□□□ -1.73
PROM1O43490 RPL23AP25-201ENST00000430973 463 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.26□□□□□ -1.73
PROM1O43490 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.26□□□□□ -1.73
PROM1O43490 SDCBPP1-201ENST00000440192 890 ntBASIC4.26□□□□□ -1.73
PROM1O43490 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.26□□□□□ -1.73
PROM1O43490 FGF7P3-201ENST00000454645 303 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AMD1P1-201ENST00000457220 922 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AP1S2P1-201ENST00000457344 379 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AC010587.1-201ENST00000505809 469 ntBASIC4.26□□□□□ -1.73
PROM1O43490 SLC25A15P5-201ENST00000508033 253 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.26□□□□□ -1.73
PROM1O43490 NPM1P41-201ENST00000512920 831 ntBASIC4.26□□□□□ -1.73
PROM1O43490 RN7SKP21-201ENST00000516503 220 ntBASIC4.26□□□□□ -1.73
PROM1O43490 RN7SKP277-201ENST00000516895 283 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AF235103.2-201ENST00000525753 346 ntBASIC4.26□□□□□ -1.73
PROM1O43490 CBX3P5-201ENST00000552017 521 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.26□□□□□ -1.73
PROM1O43490 HIF1AP1-201ENST00000553642 175 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.26□□□□□ -1.73
PROM1O43490 AC069061.3-201ENST00000582254 823 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.26□□□□□ -1.73
PROM1O43490 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.26□□□□□ -1.73
PROM1O43490 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.26□□□□□ -1.73
PROM1O43490 AC068790.5-201ENST00000602741 355 ntBASIC4.26□□□□□ -1.73
PROM1O43490 C8orf59P2-201ENST00000603441 271 ntBASIC4.26□□□□□ -1.73
PROM1O43490 RPL23AP92-201ENST00000603609 255 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AC016727.1-205ENST00000605437 569 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AL158211.4-201ENST00000606988 584 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AC009318.4-201ENST00000620496 486 ntBASIC4.26□□□□□ -1.73
PROM1O43490 AC012150.2-201ENST00000621300 544 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms