Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHF1O43189 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.12□□□□□ -1.91
PHF1O43189 AL365361.1-201ENST00000566942 3481 ntBASIC3.12□□□□□ -1.91
PHF1O43189 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHF1O43189 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PHF1O43189 RNU6-1243P-201ENST00000364028 107 ntBASIC3.12□□□□□ -1.91
PHF1O43189 SNORD116-9-201ENST00000384000 95 ntBASIC3.12□□□□□ -1.91
PHF1O43189 SNORD116-3-201ENST00000384287 95 ntBASIC3.12□□□□□ -1.91
PHF1O43189 SNORD116-7-201ENST00000384404 95 ntBASIC3.12□□□□□ -1.91
PHF1O43189 SNORD116-5-201ENST00000384462 95 ntBASIC3.12□□□□□ -1.91
PHF1O43189 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PHF1O43189 HMGB1P17-201ENST00000403495 628 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AL031577.2-201ENST00000404133 280 ntBASIC3.12□□□□□ -1.91
PHF1O43189 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.12□□□□□ -1.91
PHF1O43189 AC073264.1-201ENST00000411508 416 ntBASIC3.12□□□□□ -1.91
PHF1O43189 RPL31P2-201ENST00000413849 377 ntBASIC3.12□□□□□ -1.91
PHF1O43189 RPL23AP39-201ENST00000415533 405 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AL953862.1-201ENST00000423016 168 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AC096632.1-201ENST00000427395 310 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.12□□□□□ -1.91
PHF1O43189 SNORA71B-202ENST00000439232 272 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AC118469.1-201ENST00000442943 488 ntBASIC3.12□□□□□ -1.91
PHF1O43189 RPL21P23-201ENST00000446654 460 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.12□□□□□ -1.91
PHF1O43189 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PHF1O43189 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.12□□□□□ -1.91
PHF1O43189 BX276092.4-201ENST00000452056 248 ntBASIC3.12□□□□□ -1.91
PHF1O43189 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.12□□□□□ -1.91
PHF1O43189 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.12□□□□□ -1.91
PHF1O43189 AC108941.1-201ENST00000502853 530 ntBASIC3.12□□□□□ -1.91
PHF1O43189 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PHF1O43189 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.12□□□□□ -1.91
PHF1O43189 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.12□□□□□ -1.91
PHF1O43189 AC016065.2-201ENST00000514530 444 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.12□□□□□ -1.91
PHF1O43189 RNU6-678P-201ENST00000516832 109 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.12□□□□□ -1.91
PHF1O43189 AC008489.1-201ENST00000524271 483 ntBASIC3.12□□□□□ -1.91
PHF1O43189 OR5AP1P-201ENST00000529730 940 ntBASIC3.12□□□□□ -1.91
PHF1O43189 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.12□□□□□ -1.91
PHF1O43189 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.12□□□□□ -1.91
PHF1O43189 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.12□□□□□ -1.91
PHF1O43189 MIR4738-201ENST00000579134 87 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AC040904.1-201ENST00000590850 223 ntBASIC3.12□□□□□ -1.91
PHF1O43189 DUXAP11-201ENST00000603858 526 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AC008083.4-201ENST00000615076 444 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AC068722.2-201ENST00000618734 544 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AC244258.1-201ENST00000637553 1071 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AL392088.2-201ENST00000637607 285 ntBASIC3.12□□□□□ -1.91
PHF1O43189 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
PHF1O43189 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.12□□□□□ -1.91
PHF1O43189 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHF1O43189 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHF1O43189 AC087359.1-201ENST00000508335 1740 ntBASIC3.12□□□□□ -1.91
PHF1O43189 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PHF1O43189 AL513185.3-201ENST00000433335 1300 ntBASIC3.12□□□□□ -1.91
PHF1O43189 AL079343.1-201ENST00000572358 1771 ntBASIC3.12□□□□□ -1.91
PHF1O43189 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHF1O43189 ELL2P4-201ENST00000446870 1376 ntBASIC3.12□□□□□ -1.91
PHF1O43189 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.11□□□□□ -1.91
PHF1O43189 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PHF1O43189 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PHF1O43189 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.11□□□□□ -1.91
PHF1O43189 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PHF1O43189 SNORA38.1-201ENST00000364172 131 ntBASIC3.11□□□□□ -1.91
PHF1O43189 RNU6-1122P-201ENST00000384449 107 ntBASIC3.11□□□□□ -1.91
PHF1O43189 MIR607-201ENST00000385241 96 ntBASIC3.11□□□□□ -1.91
PHF1O43189 RPL7P60-201ENST00000397636 735 ntBASIC3.11□□□□□ -1.91
PHF1O43189 AC007390.1-201ENST00000415722 356 ntBASIC3.11□□□□□ -1.91
PHF1O43189 EI24P1-201ENST00000416584 867 ntBASIC3.11□□□□□ -1.91
PHF1O43189 AC073063.1-201ENST00000434352 607 ntBASIC3.11□□□□□ -1.91
PHF1O43189 AL590103.1-201ENST00000434488 307 ntBASIC3.11□□□□□ -1.91
PHF1O43189 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.11□□□□□ -1.91
PHF1O43189 KATNBL1P3-201ENST00000443475 909 ntBASIC3.11□□□□□ -1.91
PHF1O43189 RPL39P6-201ENST00000448289 150 ntBASIC3.11□□□□□ -1.91
PHF1O43189 RPS3AP46-201ENST00000448352 682 ntBASIC3.11□□□□□ -1.91
PHF1O43189 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.11□□□□□ -1.91
PHF1O43189 TRBV26-201ENST00000456572 344 ntBASIC3.11□□□□□ -1.91
PHF1O43189 UBDP1-202ENST00000457888 382 ntBASIC3.11□□□□□ -1.91
PHF1O43189 RNU7-170P-201ENST00000459303 61 ntBASIC3.11□□□□□ -1.91
PHF1O43189 RPS4XP10-201ENST00000465034 731 ntBASIC3.11□□□□□ -1.91
PHF1O43189 SYPL1P1-201ENST00000473622 768 ntBASIC3.11□□□□□ -1.91
PHF1O43189 NCOR1P1-202ENST00000486162 291 ntBASIC3.11□□□□□ -1.91
PHF1O43189 MTCYBP17-201ENST00000503579 789 ntBASIC3.11□□□□□ -1.91
PHF1O43189 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.11□□□□□ -1.91
PHF1O43189 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.11□□□□□ -1.91
PHF1O43189 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.11□□□□□ -1.91
PHF1O43189 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.11□□□□□ -1.91
PHF1O43189 ZNF705CP-201ENST00000530515 889 ntBASIC3.11□□□□□ -1.91
PHF1O43189 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.11□□□□□ -1.91
PHF1O43189 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.11□□□□□ -1.91
PHF1O43189 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.11□□□□□ -1.91
PHF1O43189 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.11□□□□□ -1.91
PHF1O43189 AC136618.2-201ENST00000575091 400 ntBASIC3.11□□□□□ -1.91
PHF1O43189 MIR3915-201ENST00000578518 97 ntBASIC3.11□□□□□ -1.91
PHF1O43189 MIR5187-201ENST00000583479 76 ntBASIC3.11□□□□□ -1.91
PHF1O43189 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.11□□□□□ -1.91
PHF1O43189 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.11□□□□□ -1.91
PHF1O43189 AC006539.2-201ENST00000601729 572 ntBASIC3.11□□□□□ -1.91
PHF1O43189 AL596327.1-201ENST00000603629 213 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms