Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 U4.5-201ENST00000617137 123 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 MIR7703-201ENST00000620784 77 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.25□□□□□ -1.73
PHGDHO43175 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PHGDHO43175 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PHGDHO43175 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PHGDHO43175 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PHGDHO43175 ZNF962P-201ENST00000443465 3140 ntBASIC4.25□□□□□ -1.73
PHGDHO43175 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PHGDHO43175 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PHGDHO43175 AC004925.1-201ENST00000624256 2706 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
PHGDHO43175 MFSD8-242ENST00000641690 4199 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 OR5P1P-201ENST00000299512 925 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PHGDHO43175 RNU6-181P-201ENST00000363225 107 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 RNU6-282P-201ENST00000365357 103 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PHGDHO43175 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PHGDHO43175 RNU6-882P-201ENST00000391025 103 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PHGDHO43175 RPL17P50-201ENST00000396131 546 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 HSPD1P16-201ENST00000402302 394 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 MIR548F1-201ENST00000408667 84 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 RN7SKP159-201ENST00000410657 292 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 RNA5SP39-201ENST00000411245 120 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.24□□□□□ -1.73
PHGDHO43175 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.24□□□□□ -1.73
PHGDHO43175 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.24□□□□□ -1.73
PHGDHO43175 EIF1P1-201ENST00000421436 341 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 RBMY1KP-201ENST00000423480 476 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 MTCO2P11-201ENST00000431069 680 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 RPL23AP52-201ENST00000439311 478 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.24□□□□□ -1.73
PHGDHO43175 NANOGP10-201ENST00000453325 895 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AC007182.2-201ENST00000489251 402 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 VWA8P1-201ENST00000510889 176 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.24□□□□□ -1.73
PHGDHO43175 RNU6-445P-201ENST00000516949 107 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
PHGDHO43175 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.24□□□□□ -1.73
PHGDHO43175 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PHGDHO43175 MED28P5-201ENST00000528254 438 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 MTCYBP41-201ENST00000528913 1123 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.24□□□□□ -1.73
PHGDHO43175 ZNF519P2-201ENST00000557032 169 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.24□□□□□ -1.73
PHGDHO43175 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.24□□□□□ -1.73
PHGDHO43175 AL022099.1-201ENST00000604551 712 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AC064801.1-201ENST00000612025 407 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AL450472.3-201ENST00000615578 367 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AL353748.2-201ENST00000622148 471 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 MIR4727-201ENST00000622232 55 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AC243312.2-201ENST00000623340 601 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AC091905.1-201ENST00000624400 311 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AL136313.1-201ENST00000624804 202 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AL157786.1-207ENST00000627771 695 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AC008013.2-202ENST00000637965 364 ntBASIC4.24□□□□□ -1.73
PHGDHO43175 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PHGDHO43175 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.24□□□□□ -1.73
PHGDHO43175 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.24□□□□□ -1.73
PHGDHO43175 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PHGDHO43175 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PHGDHO43175 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PHGDHO43175 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PHGDHO43175 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.23□□□□□ -1.73
PHGDHO43175 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PHGDHO43175 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PHGDHO43175 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PHGDHO43175 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PHGDHO43175 AC018529.3-201ENST00000624212 2254 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PHGDHO43175 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PHGDHO43175 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.23□□□□□ -1.73
PHGDHO43175 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PHGDHO43175 RNA5SP388-201ENST00000362584 119 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 RNVU1-6-201ENST00000364688 164 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AL109755.1-201ENST00000401791 649 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PHGDHO43175 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PHGDHO43175 RPS3AP24-201ENST00000407896 734 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 RPL37P18-201ENST00000411602 243 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.23□□□□□ -1.73
PHGDHO43175 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.23□□□□□ -1.73
PHGDHO43175 UBE2FP1-201ENST00000416536 447 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 EI24P1-201ENST00000416584 867 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 TOMM22P1-201ENST00000418578 312 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.23□□□□□ -1.73
PHGDHO43175 RPL23AP38-201ENST00000423801 469 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.23□□□□□ -1.73
PHGDHO43175 AC079780.1-201ENST00000428259 207 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AC002486.1-201ENST00000435098 391 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AC004866.2-201ENST00000438285 481 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.23□□□□□ -1.73
PHGDHO43175 AL121877.1-201ENST00000453704 622 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AL049714.1-201ENST00000466686 347 ntBASIC4.23□□□□□ -1.73
PHGDHO43175 AC010285.1-201ENST00000470580 392 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms