Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.72□□□□□ -1.65
FOXN1O15353 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.72□□□□□ -1.65
FOXN1O15353 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 RN7SL585P-201ENST00000470538 280 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.72□□□□□ -1.65
FOXN1O15353 AC139783.2-201ENST00000504847 1145 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 SNX5P1-201ENST00000505757 1041 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXN1O15353 RNA5SP154-201ENST00000516193 111 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 RNA5SP360-201ENST00000516555 118 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 IGJP1-201ENST00000522682 475 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 OR4A45P-201ENST00000529954 901 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.72□□□□□ -1.65
FOXN1O15353 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXN1O15353 HMGB1P33-201ENST00000563485 527 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 AL122125.1-201ENST00000616999 600 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 AC136475.10-201ENST00000620253 385 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.72□□□□□ -1.65
FOXN1O15353 ATE1-AS1-202ENST00000636460 506 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 MTCO1P24-201ENST00000515438 1558 ntBASIC4.72□□□□□ -1.65
FOXN1O15353 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXN1O15353 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXN1O15353 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXN1O15353 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN1O15353 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN1O15353 Z82217.1-201ENST00000625157 8149 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXN1O15353 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
FOXN1O15353 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN1O15353 RNU6-532P-201ENST00000384318 107 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 MIR217-201ENST00000384817 110 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AC092745.2-202ENST00000411880 369 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
FOXN1O15353 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN1O15353 EIF1P3-201ENST00000423841 334 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 TIMM9P3-201ENST00000428659 274 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXN1O15353 CACYBPP1-201ENST00000438592 684 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN1O15353 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN1O15353 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AC021205.1-201ENST00000468797 348 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 RPS29P19-201ENST00000479709 171 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AC006517.1-201ENST00000480485 328 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 RPS3AP14-201ENST00000483907 780 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXN1O15353 RNY4P37-201ENST00000516225 96 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 Y_RNA.704-201ENST00000516851 102 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 MTCO2P4-201ENST00000517968 247 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 MTND1P35-201ENST00000526739 508 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AP001893.2-201ENST00000526949 202 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXN1O15353 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN1O15353 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN1O15353 AC137800.2-201ENST00000574375 120 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 RPS3AP23-202ENST00000574601 686 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN1O15353 MIR3671-201ENST00000580455 88 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 MIR4795-201ENST00000584182 89 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXN1O15353 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN1O15353 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.71□□□□□ -1.66
FOXN1O15353 AC008638.3-201ENST00000603341 463 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AL139395.1-201ENST00000603662 160 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AC091488.1-201ENST00000604239 660 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AL139286.1-201ENST00000604465 483 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXN1O15353 Y_RNA.812-201ENST00000610788 101 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 MIR6868-201ENST00000611215 58 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 Y_RNA.784-201ENST00000613803 101 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 Y_RNA.787-201ENST00000616522 101 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 Y_RNA.780-201ENST00000617336 101 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 Y_RNA.801-201ENST00000619005 101 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AL139089.1-201ENST00000620372 975 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 AC079228.1-201ENST00000624774 1049 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 CRYM-AS1-204ENST00000637983 556 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN1O15353 AC090229.1-201ENST00000590983 1609 ntBASIC4.71□□□□□ -1.66
FOXN1O15353 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN1O15353 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXN1O15353 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXN1O15353 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXN1O15353 AL606537.1-201ENST00000607258 2011 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 AC117529.2-201ENST00000512159 2068 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN1O15353 SNORD74.4-201ENST00000364129 80 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
FOXN1O15353 RNU6-1227P-201ENST00000383981 107 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 RNU6-332P-201ENST00000391193 108 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 UBE2V1P2-201ENST00000397758 440 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 GSTA9P-201ENST00000406231 611 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 RNA5SP120-201ENST00000410900 112 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 RNA5SP306-201ENST00000411087 107 ntBASIC4.7□□□□□ -1.66
FOXN1O15353 RNA5SP498-201ENST00000411342 120 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms