Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.35□□□□□ -1.87
E2F3O00716 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.35□□□□□ -1.87
E2F3O00716 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.35□□□□□ -1.87
E2F3O00716 USP9YP25-201ENST00000457708 443 ntBASIC3.35□□□□□ -1.87
E2F3O00716 PNPLA4P1-201ENST00000458328 305 ntBASIC3.35□□□□□ -1.87
E2F3O00716 SNORA59A-201ENST00000459326 152 ntBASIC3.35□□□□□ -1.87
E2F3O00716 CENPBD1P1-201ENST00000464061 469 ntBASIC3.35□□□□□ -1.87
E2F3O00716 RPL23AP67-201ENST00000465341 474 ntBASIC3.35□□□□□ -1.87
E2F3O00716 AC013828.1-201ENST00000481845 158 ntBASIC3.35□□□□□ -1.87
E2F3O00716 BOLA3P3-201ENST00000505182 232 ntBASIC3.35□□□□□ -1.87
E2F3O00716 SNORA48.10-201ENST00000516965 160 ntBASIC3.35□□□□□ -1.87
E2F3O00716 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.35□□□□□ -1.87
E2F3O00716 AC087808.1-201ENST00000520501 361 ntBASIC3.35□□□□□ -1.87
E2F3O00716 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.35□□□□□ -1.87
E2F3O00716 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.35□□□□□ -1.87
E2F3O00716 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.35□□□□□ -1.87
E2F3O00716 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.35□□□□□ -1.87
E2F3O00716 MTND4P33-201ENST00000556706 766 ntBASIC3.35□□□□□ -1.87
E2F3O00716 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.35□□□□□ -1.87
E2F3O00716 GTF2IP8-201ENST00000560687 584 ntBASIC3.35□□□□□ -1.87
E2F3O00716 AADACP1-206ENST00000561502 1193 ntBASIC3.35□□□□□ -1.87
E2F3O00716 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.35□□□□□ -1.87
E2F3O00716 BDH2P1-201ENST00000602288 736 ntBASIC3.35□□□□□ -1.87
E2F3O00716 AC022022.2-201ENST00000602989 360 ntBASIC3.35□□□□□ -1.87
E2F3O00716 AC008962.1-201ENST00000605729 304 ntBASIC3.35□□□□□ -1.87
E2F3O00716 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.35□□□□□ -1.87
E2F3O00716 AC087683.2-201ENST00000611384 326 ntBASIC3.35□□□□□ -1.87
E2F3O00716 AC140725.3-201ENST00000616193 880 ntBASIC3.35□□□□□ -1.87
E2F3O00716 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.35□□□□□ -1.87
E2F3O00716 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
E2F3O00716 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
E2F3O00716 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
E2F3O00716 RNU1-33P-201ENST00000364249 162 ntBASIC3.34□□□□□ -1.87
E2F3O00716 SNORD116.1-201ENST00000365628 92 ntBASIC3.34□□□□□ -1.87
E2F3O00716 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
E2F3O00716 MIR634-201ENST00000385208 97 ntBASIC3.34□□□□□ -1.87
E2F3O00716 RNU1-101P-201ENST00000391171 127 ntBASIC3.34□□□□□ -1.87
E2F3O00716 ERHP2-201ENST00000402323 299 ntBASIC3.34□□□□□ -1.87
E2F3O00716 RNA5SP31-201ENST00000411144 127 ntBASIC3.34□□□□□ -1.87
E2F3O00716 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.34□□□□□ -1.87
E2F3O00716 RPL21P32-201ENST00000419877 477 ntBASIC3.34□□□□□ -1.87
E2F3O00716 AC233728.2-201ENST00000425348 757 ntBASIC3.34□□□□□ -1.87
E2F3O00716 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.34□□□□□ -1.87
E2F3O00716 MTND4LP10-201ENST00000435146 291 ntBASIC3.34□□□□□ -1.87
E2F3O00716 Z73417.1-201ENST00000447373 778 ntBASIC3.34□□□□□ -1.87
E2F3O00716 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.34□□□□□ -1.87
E2F3O00716 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
E2F3O00716 AC006390.1-201ENST00000508068 283 ntBASIC3.34□□□□□ -1.87
E2F3O00716 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.34□□□□□ -1.87
E2F3O00716 SNORD59.2-201ENST00000516873 68 ntBASIC3.34□□□□□ -1.87
E2F3O00716 AC107934.2-201ENST00000518653 310 ntBASIC3.34□□□□□ -1.87
E2F3O00716 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.34□□□□□ -1.87
E2F3O00716 EEF1A1P37-201ENST00000522748 715 ntBASIC3.34□□□□□ -1.87
E2F3O00716 AC022690.1-201ENST00000526681 550 ntBASIC3.34□□□□□ -1.87
E2F3O00716 AP001189.2-201ENST00000527320 189 ntBASIC3.34□□□□□ -1.87
E2F3O00716 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.87
E2F3O00716 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.34□□□□□ -1.87
E2F3O00716 TRAV37-201ENST00000553906 342 ntBASIC3.34□□□□□ -1.87
E2F3O00716 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.34□□□□□ -1.87
E2F3O00716 AL158211.1-201ENST00000566763 763 ntBASIC3.34□□□□□ -1.87
E2F3O00716 FAM60BP-201ENST00000578364 658 ntBASIC3.34□□□□□ -1.87
E2F3O00716 AC093424.1-201ENST00000604999 338 ntBASIC3.34□□□□□ -1.87
E2F3O00716 AC069545.1-201ENST00000605671 358 ntBASIC3.34□□□□□ -1.87
E2F3O00716 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.34□□□□□ -1.87
E2F3O00716 AC011330.2-201ENST00000621680 635 ntBASIC3.34□□□□□ -1.87
E2F3O00716 AL353748.2-201ENST00000622148 471 ntBASIC3.34□□□□□ -1.87
E2F3O00716 AP002782.1-201ENST00000623107 614 ntBASIC3.34□□□□□ -1.87
E2F3O00716 CYP3A51P-201ENST00000633513 256 ntBASIC3.34□□□□□ -1.87
E2F3O00716 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.34□□□□□ -1.87
E2F3O00716 MTCO1P23-201ENST00000415223 1526 ntBASIC3.34□□□□□ -1.88
E2F3O00716 PWAR6-201ENST00000552334 4618 ntBASIC3.34□□□□□ -1.88
E2F3O00716 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
E2F3O00716 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
E2F3O00716 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.33□□□□□ -1.88
E2F3O00716 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
E2F3O00716 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
E2F3O00716 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
E2F3O00716 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
E2F3O00716 RNA5SP50-201ENST00000363731 107 ntBASIC3.33□□□□□ -1.88
E2F3O00716 RNU6-657P-201ENST00000383904 107 ntBASIC3.33□□□□□ -1.88
E2F3O00716 Y_RNA.465-201ENST00000384293 102 ntBASIC3.33□□□□□ -1.88
E2F3O00716 AL590084.1-201ENST00000407885 387 ntBASIC3.33□□□□□ -1.88
E2F3O00716 RNU2-28P-201ENST00000410457 189 ntBASIC3.33□□□□□ -1.88
E2F3O00716 RNU2-42P-201ENST00000410697 113 ntBASIC3.33□□□□□ -1.88
E2F3O00716 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.33□□□□□ -1.88
E2F3O00716 Z99755.1-201ENST00000414048 380 ntBASIC3.33□□□□□ -1.88
E2F3O00716 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.33□□□□□ -1.88
E2F3O00716 XKRYP1-201ENST00000423438 492 ntBASIC3.33□□□□□ -1.88
E2F3O00716 XKRYP2-201ENST00000432915 492 ntBASIC3.33□□□□□ -1.88
E2F3O00716 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.33□□□□□ -1.88
E2F3O00716 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
E2F3O00716 MTCYBP34-201ENST00000439552 670 ntBASIC3.33□□□□□ -1.88
E2F3O00716 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.33□□□□□ -1.88
E2F3O00716 AC097262.1-201ENST00000452559 548 ntBASIC3.33□□□□□ -1.88
E2F3O00716 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.33□□□□□ -1.88
E2F3O00716 AC087312.1-201ENST00000471411 480 ntBASIC3.33□□□□□ -1.88
E2F3O00716 AC011979.1-201ENST00000472300 483 ntBASIC3.33□□□□□ -1.88
E2F3O00716 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.33□□□□□ -1.88
E2F3O00716 AC114322.1-201ENST00000506771 926 ntBASIC3.33□□□□□ -1.88
E2F3O00716 RN7SKP287-201ENST00000516546 266 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms