Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SDCBPO00560 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.03□□□□□ -2.08
SDCBPO00560 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.03□□□□□ -2.08
SDCBPO00560 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.03□□□□□ -2.08
SDCBPO00560 AL031183.1-201ENST00000457667 207 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 RNA5SP310-201ENST00000459084 116 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 AC073901.1-201ENST00000462471 408 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 RN7SL432P-201ENST00000484057 298 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.03□□□□□ -2.08
SDCBPO00560 AC008565.1-201ENST00000509046 885 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 RNA5SP320-201ENST00000516263 124 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.03□□□□□ -2.08
SDCBPO00560 AC083923.1-201ENST00000523708 376 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.03□□□□□ -2.08
SDCBPO00560 OR4R2P-201ENST00000530815 597 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 AC087241.2-201ENST00000535801 324 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.03□□□□□ -2.08
SDCBPO00560 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.03□□□□□ -2.08
SDCBPO00560 AC106791.2-201ENST00000604680 391 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 AC019159.1-201ENST00000605094 187 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 AC004775.1-201ENST00000607389 753 ntBASIC2.03□□□□□ -2.08
SDCBPO00560 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.03□□□□□ -2.08
SDCBPO00560 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.03□□□□□ -2.08
SDCBPO00560 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.03□□□□□ -2.08
SDCBPO00560 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.03□□□□□ -2.08
SDCBPO00560 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SDCBPO00560 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SDCBPO00560 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SDCBPO00560 RNU6-252P-201ENST00000363232 107 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 RNU6-799P-201ENST00000363567 107 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 SNORD114-30-201ENST00000364448 72 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.02□□□□□ -2.09
SDCBPO00560 RNU6-1027P-201ENST00000383998 107 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 AL356057.2-201ENST00000403318 432 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 U3.37-201ENST00000408528 213 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.02□□□□□ -2.09
SDCBPO00560 AF274854.1-201ENST00000413236 615 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.02□□□□□ -2.09
SDCBPO00560 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.02□□□□□ -2.09
SDCBPO00560 NUP35P1-201ENST00000422734 947 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.02□□□□□ -2.09
SDCBPO00560 AC091390.3-201ENST00000426478 338 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.02□□□□□ -2.09
SDCBPO00560 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.02□□□□□ -2.09
SDCBPO00560 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.02□□□□□ -2.09
SDCBPO00560 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.02□□□□□ -2.09
SDCBPO00560 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SDCBPO00560 RPS29P12-201ENST00000460178 152 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SDCBPO00560 RNF138P1-201ENST00000502765 546 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.02□□□□□ -2.09
SDCBPO00560 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.02□□□□□ -2.09
SDCBPO00560 AP003385.6-201ENST00000531603 374 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 AC092470.1-201ENST00000546187 132 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 AC078814.3-201ENST00000553036 491 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 AC012414.2-201ENST00000559474 187 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 AC090666.1-201ENST00000578241 445 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 RPL23AP92-201ENST00000603609 255 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 AC009570.1-201ENST00000609599 745 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 AC092650.2-201ENST00000619984 902 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.02□□□□□ -2.09
SDCBPO00560 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.02□□□□□ -2.09
SDCBPO00560 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.02□□□□□ -2.09
SDCBPO00560 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SDCBPO00560 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SDCBPO00560 ZNF734P-201ENST00000419494 1534 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
SDCBPO00560 AC007342.9-201ENST00000623877 1385 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SDCBPO00560 RNU6-1249P-201ENST00000363237 111 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.01□□□□□ -2.09
SDCBPO00560 RNU6-339P-201ENST00000384310 107 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 SNORA80E-201ENST00000384744 137 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SDCBPO00560 RNA5SP252-201ENST00000391131 119 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 U3.26-201ENST00000391236 204 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SDCBPO00560 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.01□□□□□ -2.09
SDCBPO00560 HMGN2P30-201ENST00000423237 256 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 AC079780.1-201ENST00000428259 207 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 AC010881.1-201ENST00000433830 235 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 AL645638.1-201ENST00000440519 361 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 RPS26P30-201ENST00000443431 335 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.01□□□□□ -2.09
SDCBPO00560 AC005002.1-201ENST00000447458 540 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 RPS27P23-201ENST00000487608 251 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.01□□□□□ -2.09
SDCBPO00560 PRELID2P1-201ENST00000552837 301 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.01□□□□□ -2.09
SDCBPO00560 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.01□□□□□ -2.09
SDCBPO00560 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.01□□□□□ -2.09
SDCBPO00560 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.01□□□□□ -2.09
SDCBPO00560 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.01□□□□□ -2.09
SDCBPO00560 AC090312.2-201ENST00000582687 378 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.01□□□□□ -2.09
SDCBPO00560 AC010620.2-201ENST00000600135 313 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 AC007621.1-201ENST00000604544 437 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 NUTF2P8-201ENST00000604593 363 ntBASIC2.01□□□□□ -2.09
SDCBPO00560 AC079610.2-201ENST00000604818 690 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms