Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NEK4P1-201ENST00000433383 879 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC073063.1-201ENST00000434352 607 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 MTCO2P20-201ENST00000437339 673 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 HMGN2P20-201ENST00000437531 273 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC28A1O00337 MTND3P1-201ENST00000441336 220 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC002381.1-201ENST00000447049 280 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC125238.1-201ENST00000448842 249 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC234775.1-201ENST00000454247 670 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 MEMO1P3-201ENST00000459811 302 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC025518.1-201ENST00000479856 347 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC106707.2-201ENST00000484182 374 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC28A1O00337 TXNP6-201ENST00000510190 310 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC28A1O00337 RNU6-311P-201ENST00000516224 102 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 IGKV2-26-201ENST00000518305 343 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC103783.1-201ENST00000520506 373 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 COX6CP8-201ENST00000522620 226 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC28A1O00337 AC006518.1-201ENST00000541449 943 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.21□□□□□ -1.9
SLC28A1O00337 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC28A1O00337 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC28A1O00337 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.21□□□□□ -1.9
SLC28A1O00337 GTF2IP22-201ENST00000554443 182 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 MTND4P33-201ENST00000556706 766 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC28A1O00337 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.21□□□□□ -1.9
SLC28A1O00337 MIR4474-201ENST00000579189 78 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC013444.2-201ENST00000603317 787 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AL450336.1-201ENST00000605180 586 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC007349.4-201ENST00000608114 532 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC28A1O00337 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC28A1O00337 MIR8058-201ENST00000615737 89 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 AC068831.8-201ENST00000620171 435 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 ZNF807-201ENST00000328088 1707 ntBASIC3.21□□□□□ -1.9
SLC28A1O00337 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.21□□□□□ -1.9
SLC28A1O00337 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SLC28A1O00337 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.9
SLC28A1O00337 AC093010.3-201ENST00000570269 15214 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 AL513185.3-201ENST00000433335 1300 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC28A1O00337 FRG1BP-201ENST00000278882 761 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC28A1O00337 SNORD56.3-201ENST00000363507 71 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 U3.11-201ENST00000364476 212 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC28A1O00337 SNORA5A-201ENST00000384111 134 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC28A1O00337 RNU6ATAC-201ENST00000408749 126 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 RNA5SP44-201ENST00000410446 133 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 RNA5SP293-201ENST00000410527 113 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 AC109780.2-201ENST00000413467 845 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC28A1O00337 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC28A1O00337 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC28A1O00337 UBE2D3P2-201ENST00000424409 445 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC28A1O00337 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC28A1O00337 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC28A1O00337 MTND5P14-201ENST00000441481 1267 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC28A1O00337 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.2□□□□□ -1.9
SLC28A1O00337 USP9YP10-201ENST00000454868 628 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 AC108860.1-201ENST00000484521 383 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 KCTD9P5-201ENST00000504141 1170 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 VN1R104P-201ENST00000505115 1009 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC28A1O00337 PAICSP4-201ENST00000517543 1253 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC28A1O00337 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC28A1O00337 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SLC28A1O00337 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SLC28A1O00337 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC28A1O00337 AP005205.1-201ENST00000563503 508 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC28A1O00337 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC28A1O00337 AC011451.2-201ENST00000604303 598 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 AL158042.1-201ENST00000605338 460 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC28A1O00337 AC127502.3-201ENST00000636170 1206 ntBASIC3.2□□□□□ -1.9
SLC28A1O00337 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC28A1O00337 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC28A1O00337 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SLC28A1O00337 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SLC28A1O00337 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC28A1O00337 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC28A1O00337 RNU4-35P-201ENST00000362588 141 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 RNU1-64P-201ENST00000365443 163 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC28A1O00337 RN7SKP202-201ENST00000410439 330 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 CYCSP19-201ENST00000411715 316 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 BX842559.1-201ENST00000419615 532 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 ZYG11AP1-201ENST00000430329 837 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 AC007389.2-201ENST00000434630 306 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 AC024082.2-201ENST00000434771 238 ntBASIC3.19□□□□□ -1.9
SLC28A1O00337 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms