Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC188H7C350 AC026801.2-201ENST00000515352 425 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC105185.1-201ENST00000518705 535 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC188H7C350 COX6CP8-201ENST00000522620 226 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC023050.2-201ENST00000544968 387 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AL354943.1-201ENST00000572103 781 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC006116.10-201ENST00000591836 581 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC020914.6-201ENST00000594327 272 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC188H7C350 AL596327.1-201ENST00000603629 213 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC107952.2-201ENST00000606048 486 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC188H7C350 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC188H7C350 AL136981.2-201ENST00000617319 734 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AL607023.1-201ENST00000620045 248 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 SNORD39.4-201ENST00000620099 78 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AL445264.1-201ENST00000621719 171 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 AC009039.2-201ENST00000624524 529 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC188H7C350 AC119674.1-207ENST00000641355 633 ntBASIC3.53□□□□□ -1.84
CCDC188H7C350 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC188H7C350 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC188H7C350 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC188H7C350 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC188H7C350 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC188H7C350 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC188H7C350 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
CCDC188H7C350 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC188H7C350 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCDC188H7C350 AL513185.3-201ENST00000433335 1300 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC188H7C350 FRG1BP-201ENST00000278882 761 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 MIR148B-201ENST00000362252 99 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 RNA5SP51-201ENST00000364750 119 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC188H7C350 MIR23B-201ENST00000384832 97 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 AL356421.1-201ENST00000403255 413 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC188H7C350 MTCO2P17-201ENST00000424336 677 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC188H7C350 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC188H7C350 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC188H7C350 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC188H7C350 OR6K5P-201ENST00000447050 945 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 U3.44-201ENST00000458938 192 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 AP001025.2-201ENST00000490908 477 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CCDC188H7C350 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC188H7C350 AC105914.1-201ENST00000511798 226 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 RNA5SP217-201ENST00000515959 91 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 SNORA3.4-201ENST00000515969 96 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 SNORA31.8-201ENST00000516327 108 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 SCARNA20.6-201ENST00000517251 106 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC188H7C350 AC245166.1-201ENST00000521012 253 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC188H7C350 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC188H7C350 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC188H7C350 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC188H7C350 AC012443.1-201ENST00000605605 231 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC188H7C350 AL353748.2-201ENST00000622148 471 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC188H7C350 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC188H7C350 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC188H7C350 AL645937.1-201ENST00000641739 1652 ntBASIC3.52□□□□□ -1.85
CCDC188H7C350 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC188H7C350 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CCDC188H7C350 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC188H7C350 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC188H7C350 AC004972.1-201ENST00000623934 2209 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 ZNF542P-204ENST00000482727 1305 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC188H7C350 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
CCDC188H7C350 PTMAP5-201ENST00000393073 333 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 RNU4-65P-201ENST00000410473 140 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC188H7C350 YPEL5P1-201ENST00000419731 367 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 MTCO2P21-201ENST00000419780 677 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 MTND1P32-201ENST00000433043 938 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 AL354941.1-201ENST00000438600 464 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC188H7C350 MTND1P31-201ENST00000449206 961 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 SNORD105B-201ENST00000458770 79 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 RN7SL330P-201ENST00000469709 307 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC188H7C350 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC188H7C350 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC188H7C350 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC188H7C350 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC188H7C350 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC188H7C350 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CCDC188H7C350 MTND5P4-201ENST00000514978 288 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC188H7C350 RNU1-61P-201ENST00000516107 151 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 RNU1-143P-201ENST00000516296 146 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 AC093331.1-201ENST00000521474 169 ntBASIC3.51□□□□□ -1.85
CCDC188H7C350 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC188H7C350 AP001372.4-201ENST00000524889 472 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms