Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AP001148.1-201ENST00000624124 2359 ntBASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA3F8WFD2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AL645937.1-201ENST00000641739 1652 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC007823.1-201ENST00000569932 1566 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 CEP170P1-201ENST00000502249 4587 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 RNA5SP72-201ENST00000364442 117 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 Y_RNA.548-201ENST00000384656 105 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 MIR135A2-201ENST00000384854 100 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 EI24P2-201ENST00000397776 1076 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AL590084.2-201ENST00000401481 382 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 SSXP9-201ENST00000417503 292 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 OR1AA1P-201ENST00000419597 916 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 BX119904.4-201ENST00000424402 301 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 DUTP6-201ENST00000425573 462 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 NEK4P1-201ENST00000433383 879 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 LSM1P1-201ENST00000438629 273 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 RPL21P23-201ENST00000446654 460 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 MTCO1P27-201ENST00000448269 226 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC073387.1-201ENST00000453261 709 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 RPL30P9-201ENST00000465586 330 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC104563.1-201ENST00000476147 376 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC017037.2-201ENST00000513850 890 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC034159.1-201ENST00000513885 583 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 MTCO2P32-201ENST00000514865 403 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 RNA5SP216-201ENST00000516111 123 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 RNU6-714P-201ENST00000516963 103 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 VN1R92P-201ENST00000598511 928 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AL353778.1-201ENST00000603149 408 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 ELOCP35-201ENST00000604289 336 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AL022099.1-201ENST00000604551 712 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AL365503.1-201ENST00000605247 905 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 Z99289.3-201ENST00000605586 594 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC024560.3-201ENST00000608482 349 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 TUG1_1.1-201ENST00000610654 145 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC009464.1-201ENST00000615731 469 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC018816.2-201ENST00000621460 353 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AL360181.4-201ENST00000621752 134 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AL353748.2-201ENST00000622148 471 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AC009039.2-201ENST00000624524 529 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 U6.105-201ENST00000637379 88 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 AL392088.2-201ENST00000637607 285 ntBASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPIPA3F8WFD2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AC093908.1-201ENST00000623125 8092 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 FRG1BP-201ENST00000278882 761 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 SNORD9-201ENST00000362566 104 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 RNU6-97P-201ENST00000363387 104 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 RNU6-744P-201ENST00000365557 107 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 RNA5SP88-201ENST00000365560 109 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 RNU6-1316P-201ENST00000384242 108 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 RNU6-1207P-201ENST00000384343 107 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AC119751.3-201ENST00000399720 670 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AL356421.1-201ENST00000403255 413 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 MTHFD2P2-201ENST00000407725 247 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 RAP1BP1-201ENST00000412709 553 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AC009237.5-201ENST00000414271 501 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 BX842559.1-201ENST00000419615 532 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AC245054.1-201ENST00000420944 258 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 BEND7P1-201ENST00000422058 457 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 MTND1P20-201ENST00000430341 950 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AL662791.1-201ENST00000441992 928 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AL606662.1-201ENST00000445763 553 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 OR6C5P-201ENST00000452388 923 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 AL139824.2-201ENST00000458731 1095 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 LINC00888-204ENST00000487386 421 ntBASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.29□□□□□ -1.88
NPIPA3F8WFD2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms