Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AL035079.1-201ENST00000405210 287 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 RNU6-712P-201ENST00000410558 100 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AC005094.1-201ENST00000440420 368 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 PRDX3P3-201ENST00000447765 522 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 RPS27AP13-201ENST00000498403 237 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 NRON-201ENST00000517270 370 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 TRAV8-5-201ENST00000537369 341 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 GLUD1P4-201ENST00000590914 418 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AC113403.1-201ENST00000604910 193 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AC093788.1-201ENST00000609356 927 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 MTCO1P9-201ENST00000505577 1534 ntBASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC85CA6NKD9 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 RNU6-74P-201ENST00000384235 107 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 RNU6-278P-201ENST00000390945 109 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 RNU6-516P-201ENST00000411381 104 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AMD1P2-201ENST00000412936 992 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 SNRPFP1-201ENST00000414761 252 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 OR4K11P-201ENST00000431829 904 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AL662791.1-201ENST00000441992 928 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 NFU1P2-201ENST00000448700 469 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 FDX1P2-201ENST00000450769 375 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC005008.1-201ENST00000456151 612 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC027673.1-201ENST00000456245 405 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 RNU6-420P-201ENST00000458780 107 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AL049714.1-201ENST00000466686 347 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC090602.1-201ENST00000469695 252 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC135721.1-201ENST00000497954 479 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC108145.1-201ENST00000503770 153 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC016559.2-201ENST00000510759 359 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 SNORD27.1-201ENST00000516319 72 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 Y_RNA.704-201ENST00000516851 102 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 HMGB1P6-201ENST00000569046 646 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC104984.5-201ENST00000586878 94 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AL162413.1-201ENST00000603198 110 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC025449.1-201ENST00000603896 529 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC015967.1-201ENST00000619893 476 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 AC105074.1-201ENST00000623380 3095 ntBASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC85CA6NKD9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 RNU6-867P-201ENST00000364956 107 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 RNU6-432P-201ENST00000384196 109 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 AL109755.1-201ENST00000401791 649 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 RNU6-908P-201ENST00000410160 94 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 SNRPEP10-201ENST00000420249 274 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 E2F6P2-201ENST00000420708 748 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 RGS17P1-201ENST00000423358 553 ntBASIC5.1□□□□□ -1.59
CCDC85CA6NKD9 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms