Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SSXP4-201ENST00000451349 245 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 PABPC1P3-201ENST00000469174 459 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 RPS27AP1-201ENST00000475545 471 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC012181.1-201ENST00000479895 423 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 GAPDHP39-201ENST00000481866 979 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 RN7SL20P-201ENST00000488827 297 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC008837.2-201ENST00000513076 418 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 RNU6-885P-201ENST00000516607 104 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 MTCO2P15-201ENST00000532655 656 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 ZNF321P-202ENST00000550843 495 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 MIR3186-201ENST00000577404 85 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 MIR7975-201ENST00000619350 68 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 AP005901.5-201ENST00000545779 1796 ntBASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49BA6NDI0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 ERHP2-201ENST00000402323 299 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AL133264.1-201ENST00000407157 562 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 RNU6-712P-201ENST00000410558 100 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 ARF4P2-201ENST00000430209 526 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 CETN4P-201ENST00000432407 469 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 ELOCP23-201ENST00000452014 332 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AL136097.1-201ENST00000456945 913 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 BTF3P5-201ENST00000457252 467 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 RPL23AP44-201ENST00000482216 473 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 HSPD1P15-201ENST00000505573 1122 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC021146.8-201ENST00000507455 733 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC074250.1-201ENST00000511117 192 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AADACP1-206ENST00000561502 1193 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC087481.2-201ENST00000565492 330 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 MIR4474-201ENST00000579189 78 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 UBL5P2-201ENST00000583788 219 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC061975.8-201ENST00000587058 721 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AP001269.3-201ENST00000588718 329 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 ELOCP35-201ENST00000604289 336 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AP003973.1-201ENST00000604639 691 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC080013.3-201ENST00000606839 578 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AL450489.1-201ENST00000612071 468 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 AC018816.2-201ENST00000621460 353 ntBASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TRIM49BA6NDI0 NUP58P1-201ENST00000502546 1738 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 OR1S2-201ENST00000302592 978 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 RNA5SP72-201ENST00000364442 117 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 SNORA9-201ENST00000384215 133 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 AL590084.1-201ENST00000407885 387 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 AL161449.1-201ENST00000414531 1199 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 AC010099.3-201ENST00000423896 409 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 AC005326.1-201ENST00000429197 123 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 MTCYBP31-201ENST00000438855 1122 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 UQCRHP3-201ENST00000451503 251 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 RN7SL863P-201ENST00000462370 296 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 MTCO2P6-201ENST00000463134 685 ntBASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM49BA6NDI0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms