Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC007115.1-201ENST00000546853 234 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC023158.1-201ENST00000561632 1025 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 MIR4319-201ENST00000577285 85 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC090616.3-201ENST00000582184 217 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AL669831.4-202ENST00000590817 238 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AL035413.2-201ENST00000604801 525 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC034102.8-201ENST00000615146 484 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 PABPC1P9-201ENST00000426076 1612 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC062016.1-201ENST00000355719 319 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 TAS2R15P-201ENST00000390674 928 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 U3.26-201ENST00000391236 204 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 NDUFB4P4-201ENST00000404822 243 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 RNF19BPX-201ENST00000426224 625 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC005002.1-201ENST00000447458 540 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC104687.1-201ENST00000485829 412 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC090543.1-201ENST00000492168 485 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC021087.2-201ENST00000504656 1203 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 HMGB3P3-201ENST00000510526 400 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 MTCO3P44-201ENST00000510977 541 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 SNORA31.8-201ENST00000516327 108 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 CKS1BP1-201ENST00000555221 240 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 MTCYBP28-201ENST00000566728 1132 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC103810.1-201ENST00000579873 453 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AL645944.1-201ENST00000603857 493 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC073111.2-201ENST00000605657 1075 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC135803.1-201ENST00000608748 565 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC117490.2-201ENST00000610042 594 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 MIR6895-201ENST00000613497 78 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AC097372.4-201ENST00000625025 466 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AL359693.1-201ENST00000614959 2407 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 AL365361.1-201ENST00000566942 3481 ntBASIC1.89□□□□□ -2.11
HLA-DRB4X5D2U9 Z82209.1-201ENST00000422141 2135 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 RNU6-673P-201ENST00000365084 104 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 MIR196B-201ENST00000384852 84 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 DHFRP5-201ENST00000406944 564 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 RNU2-52P-201ENST00000410680 190 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 NUP35P1-201ENST00000422734 947 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AL645638.1-201ENST00000440519 361 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AL627224.1-201ENST00000448334 444 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AL034418.1-201ENST00000448675 860 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AC025768.1-201ENST00000510057 267 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AC108157.1-201ENST00000510511 539 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 RNA5SP471-201ENST00000516971 106 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 RN7SKP283-201ENST00000517197 270 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AP001804.3-201ENST00000525146 880 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 MIR4504-201ENST00000577413 92 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 BNIP3P7-201ENST00000605641 516 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AL354950.1-201ENST00000614150 568 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 CYP3A51P-201ENST00000633513 256 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 ZNF658B-202ENST00000615961 3375 ntBASIC1.88□□□□□ -2.11
HLA-DRB4X5D2U9 AC007342.9-201ENST00000623877 1385 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 AL139276.1-201ENST00000311910 1001 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 RNA5SP258-201ENST00000362750 119 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 SNORA5B-201ENST00000363786 132 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 MIR27B-201ENST00000385129 97 ntBASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
HLA-DRB4X5D2U9 AC007064.1-201ENST00000412238 351 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms