Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHAC2Q9Y5I4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4□□□□□ -1.77
PCDHAC2Q9Y5I4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PCDHAC2Q9Y5I4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4□□□□□ -1.77
PCDHAC2Q9Y5I4 AC068647.1-201ENST00000489539 2265 ntBASIC4□□□□□ -1.77
PCDHAC2Q9Y5I4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4□□□□□ -1.77
PCDHAC2Q9Y5I4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC008725.1-201ENST00000605123 2263 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 RNU1-70P-201ENST00000362618 164 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 RNU6-623P-201ENST00000363143 105 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 SUGT1P1-201ENST00000379514 476 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 HMGN2P8-201ENST00000391458 268 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AL121978.1-201ENST00000402778 359 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AL031577.2-201ENST00000404133 280 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 RPL31P54-201ENST00000429803 370 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 FTH1P6-201ENST00000430768 320 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC006028.1-201ENST00000438379 402 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 RPS29P31-201ENST00000446147 164 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AP000936.2-201ENST00000447151 681 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 OR4G11P-201ENST00000492842 939 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AL024509.2-201ENST00000493462 493 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC022447.1-201ENST00000515358 464 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 RFPL1S-203ENST00000539579 330 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 CBX3P5-201ENST00000552017 521 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC141257.3-201ENST00000572906 215 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 LARP7P3-201ENST00000579888 337 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 RSL24D1P11-201ENST00000591045 491 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC073114.1-201ENST00000612027 490 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC100793.4-201ENST00000613683 429 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC090229.1-201ENST00000590983 1609 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 AC107081.3-201ENST00000612715 2034 ntBASIC3.99□□□□□ -1.77
PCDHAC2Q9Y5I4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 RNU6-500P-201ENST00000362349 107 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 Y_RNA.25-201ENST00000362528 102 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 SNORA26.8-201ENST00000391306 124 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 Y_RNA.599-201ENST00000410489 109 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 RNU6-920P-201ENST00000410926 92 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC092634.6-201ENST00000418558 192 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC009237.2-201ENST00000421358 284 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC006366.1-201ENST00000422002 759 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 IFNNP1-201ENST00000429219 553 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 RPL36P19-201ENST00000430744 301 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 RPL23AP69-201ENST00000431134 458 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC241584.1-201ENST00000438469 1241 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC025750.2-201ENST00000442609 450 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 RPL21P71-201ENST00000465598 459 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AP000926.1-201ENST00000479573 241 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC013828.1-201ENST00000481845 158 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 RNU6-1261P-201ENST00000517194 104 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC060788.1-201ENST00000521318 469 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 ACTR3BP3-201ENST00000565577 979 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC074051.3-201ENST00000570238 358 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC006270.3-201ENST00000605967 1036 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC004492.1-201ENST00000607036 742 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 AC103591.3-201ENST00000608684 209 ntBASIC3.98□□□□□ -1.77
PCDHAC2Q9Y5I4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms