Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 CHEK2P4-201ENST00000450340 246 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 EIF4A1P11-201ENST00000451239 222 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 PRELID3BP1-201ENST00000457142 540 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 RNU7-167P-201ENST00000459160 62 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 FO393415.2-201ENST00000480085 343 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 CEACAMP10-202ENST00000495431 496 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 AC026801.1-201ENST00000497178 464 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 IGLV3-24-201ENST00000517477 197 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 AL355812.1-201ENST00000603215 216 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 AL138889.2-201ENST00000603883 242 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 AC010201.1-201ENST00000605051 540 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 AL158032.1-201ENST00000605401 106 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 AC015982.1-201ENST00000608113 465 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 AC006329.2-201ENST00000611491 394 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 MIR6071-201ENST00000616741 78 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 MIR6133-201ENST00000617057 108 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 SNHG22-203ENST00000617833 660 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 AL589994.2-201ENST00000621124 579 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 AC010266.2-201ENST00000564741 3255 ntBASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIF3AQ9Y2N7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AP005435.3-201ENST00000531260 3198 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 MTND5P6-201ENST00000422338 1798 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC092681.1-201ENST00000297369 291 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RNY3P11-201ENST00000364153 102 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 Y_RNA.214-201ENST00000364201 112 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RNU6-200P-201ENST00000364743 107 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RNU6-946P-201ENST00000383878 107 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RNU6-842P-201ENST00000384269 107 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RNU6-339P-201ENST00000384310 107 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RNU6-393P-201ENST00000384475 107 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC004386.1-201ENST00000393214 761 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RNA5SP111-201ENST00000411386 101 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 UBE2FP1-201ENST00000416536 447 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AL137014.1-201ENST00000420490 1226 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 ELOCP20-201ENST00000422460 345 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 SDAD1P3-201ENST00000427380 333 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 PSMA2P3-201ENST00000429685 675 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RPS17P8-201ENST00000434525 335 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RHOT1P3-201ENST00000436571 331 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 CYCSP24-201ENST00000445119 316 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC105399.1-202ENST00000447303 205 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 CYCSP34-201ENST00000458172 304 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RN7SL188P-201ENST00000469842 285 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC096745.1-201ENST00000509945 370 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RNU6-570P-201ENST00000517051 105 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RNU6-111P-201ENST00000517179 105 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 RN7SKP92-201ENST00000517266 244 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AP001922.4-201ENST00000526967 290 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC040926.1-201ENST00000530195 238 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 OR5D17P-201ENST00000531492 978 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AP003385.6-201ENST00000531603 374 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC005899.2-201ENST00000584353 90 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 MIR6861-201ENST00000618657 64 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AL137003.2-201ENST00000606924 2538 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 AC107027.3-201ENST00000565095 3473 ntBASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIF3AQ9Y2N7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIF3AQ9Y2N7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.06□□□□□ -1.6
HIF3AQ9Y2N7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HIF3AQ9Y2N7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIF3AQ9Y2N7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms