Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AC022483.1-201ENST00000514020 567 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 SNORA67.7-201ENST00000516664 135 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 SNORA18.6-201ENST00000516792 115 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AC107016.1-201ENST00000550463 337 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 TPRKBP2-201ENST00000565969 475 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 MIR4429-201ENST00000580105 73 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 MIR3682-201ENST00000581338 84 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 MIR3158-1-201ENST00000583596 81 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AC009977.1-201ENST00000586015 570 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AL138721.1-201ENST00000616756 179 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AC138649.3-201ENST00000622154 254 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 CYP3A51P-201ENST00000633513 256 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 OR5H6-203ENST00000642105 978 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX2IPQ9Y2D8 AP002001.2-201ENST00000529025 1469 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 MIR181A1-201ENST00000385026 110 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 MIR548F1-201ENST00000408667 84 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 Y_RNA.604-201ENST00000410574 102 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 CYCSP19-201ENST00000411715 316 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AMD1P2-201ENST00000412936 992 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 JKAMPP1-201ENST00000413804 919 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 NUP35P2-201ENST00000416748 943 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC007742.1-201ENST00000425789 329 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AL445669.1-201ENST00000426743 755 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 ELOCP26-201ENST00000436067 329 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 UBE2V1P8-201ENST00000437166 265 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 RSU1P2-202ENST00000437884 485 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC002381.1-201ENST00000447049 280 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC099563.1-201ENST00000456086 418 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 BTF3P5-201ENST00000457252 467 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 RPL9P6-201ENST00000492764 598 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC104164.2-201ENST00000496953 495 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC091133.4-201ENST00000511142 308 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 RNU1-45P-201ENST00000517191 141 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 MTCO2P4-201ENST00000517968 247 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 RPL21P5-201ENST00000554662 472 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC234778.2-201ENST00000566241 354 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC022655.2-201ENST00000577280 318 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 OR4G1P-201ENST00000588632 938 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC005255.1-201ENST00000593748 216 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC110741.2-201ENST00000605278 268 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC091304.9-201ENST00000612091 226 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC099669.2-201ENST00000616549 437 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC233309.1-201ENST00000619522 751 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 AC019278.1-201ENST00000623516 479 ntBASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.43□□□□□ -1.7
SSX2IPQ9Y2D8 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SSX2IPQ9Y2D8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms