Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 HMGB1P20-201ENST00000402555 677 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC011933.1-201ENST00000413334 321 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 BX842559.1-201ENST00000419615 532 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC090804.1-201ENST00000448870 490 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 CEACAMP6-201ENST00000452007 574 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC091180.1-201ENST00000462104 372 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC068781.1-201ENST00000488231 618 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 SNORA31.22-201ENST00000517204 135 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC087369.1-201ENST00000520775 996 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC022616.4-201ENST00000522985 181 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC051619.2-201ENST00000559063 397 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 BNIP3P5-201ENST00000562290 498 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 MIR1273E-201ENST00000581165 102 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 HMGN2P28-201ENST00000606102 262 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AL138825.1-201ENST00000618587 192 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC005183.1-201ENST00000603687 1979 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 AC004076.2-201ENST00000620532 3323 ntBASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXD3Q9UJU5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
FOXD3Q9UJU5 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.15□□□□□ -1.58
FOXD3Q9UJU5 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.15□□□□□ -1.58
FOXD3Q9UJU5 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
FOXD3Q9UJU5 MIR133A2-201ENST00000347538 102 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RNU6-596P-201ENST00000365395 98 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RNU6-842P-201ENST00000384269 107 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RNU6-784P-201ENST00000384330 106 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 MIR105-2-201ENST00000385083 81 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 MT-TR-201ENST00000387439 65 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RNU6-1109P-201ENST00000391187 107 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RN7SKP279-201ENST00000411383 298 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 AC096664.2-201ENST00000411843 406 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RPL21P90-201ENST00000415692 466 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 EI24P4-201ENST00000423683 1078 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 AL591623.2-201ENST00000449978 222 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 AC112492.4-201ENST00000456549 352 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RNU1-88P-201ENST00000459274 128 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RNU6-914P-201ENST00000516749 109 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 AC126615.2-201ENST00000553003 515 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RN7SL652P-201ENST00000577769 300 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 OR7E18P-201ENST00000592589 702 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 NUTF2P8-201ENST00000604593 363 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 ELOCP5-201ENST00000604924 333 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 AC018889.1-201ENST00000605372 397 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 AL512624.1-201ENST00000613638 469 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RNA5SP439-201ENST00000617595 124 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 CU639417.4-201ENST00000623928 207 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 AC000095.2-202ENST00000637415 154 ntBASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXD3Q9UJU5 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms