Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 TRBV26-201ENST00000456572 344 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC093278.1-201ENST00000494700 600 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 KLRA1P-201ENST00000503499 986 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC112198.1-201ENST00000505369 1220 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 MTND1P22-201ENST00000510572 951 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 RN7SKP122-201ENST00000515923 296 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 RNA5SP217-201ENST00000515959 91 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC104986.1-201ENST00000517978 436 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC092470.1-201ENST00000546187 132 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 SYF2P1-201ENST00000550658 413 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 BNIP3P5-201ENST00000562290 498 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC020914.6-201ENST00000594327 272 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 WISP1-OT1-201ENST00000602893 642 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 MIR6867-201ENST00000610636 67 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AL356266.1-201ENST00000623311 483 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AL356596.1-201ENST00000624230 379 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC091965.5-201ENST00000624785 342 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 PCMTD1P7-201ENST00000634506 357 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 AC130650.2-201ENST00000618736 2403 ntBASIC3.31□□□□□ -1.88
NDE1Q9NXR1 ELL2P3-201ENST00000457883 1602 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 RPL21P132-201ENST00000331267 462 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 RNU6-433P-201ENST00000363216 104 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 Y_RNA.302-201ENST00000364997 102 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AL133384.1-201ENST00000412744 351 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 NDUFB4P5-201ENST00000415445 361 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC016907.1-201ENST00000419483 435 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AL390023.1-201ENST00000428836 262 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 Z99127.3-201ENST00000448158 395 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC104308.1-201ENST00000454621 333 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC097493.1-201ENST00000463958 372 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 PLGLA-201ENST00000465668 449 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 RPL30P6-201ENST00000475925 342 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC006499.2-201ENST00000513470 337 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC026402.1-201ENST00000513642 170 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC117532.1-201ENST00000514638 323 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC007954.1-201ENST00000554198 494 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC006557.5-201ENST00000603126 811 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 DUXAP11-201ENST00000603858 526 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 SNORA51-201ENST00000606420 132 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC068724.3-201ENST00000625906 87 ntBASIC3.3□□□□□ -1.88
NDE1Q9NXR1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
NDE1Q9NXR1 AC008264.2-201ENST00000610193 3731 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AL445523.1-201ENST00000451184 1362 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 RNA5SP295-201ENST00000362655 121 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 RNU6-777P-201ENST00000364265 104 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC007066.1-201ENST00000392902 381 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 RPL21P3-201ENST00000395517 478 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AL031577.2-201ENST00000404133 280 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.29□□□□□ -1.88
NDE1Q9NXR1 RPL7P30-201ENST00000420888 709 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 AC012065.2-201ENST00000421295 375 ntBASIC3.29□□□□□ -1.88
NDE1Q9NXR1 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms