Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 OR5AQ1P-201ENST00000527596 927 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AK6P1-201ENST00000540219 478 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AL133241.1-201ENST00000556832 487 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 GLUD1P4-201ENST00000590914 418 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 TUG1_2.1-201ENST00000614234 87 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC007014.2-201ENST00000615581 479 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC139792.3-201ENST00000623525 224 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC027290.2-201ENST00000623210 18662 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MKS1Q9NXB0 AC066616.2-201ENST00000559334 1481 ntBASIC4.49□□□□□ -1.69
MKS1Q9NXB0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 MIR448-201ENST00000362131 111 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 RNU6-1085P-201ENST00000363576 107 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 RNU6-1283P-201ENST00000365314 105 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 RPS3AP24-201ENST00000407896 734 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 RNA5SP104-201ENST00000410989 118 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 MTATP6P18-201ENST00000417994 673 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AL355433.1-201ENST00000422804 300 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 RPL23AP30-201ENST00000432419 501 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 NRBF2P3-201ENST00000432731 865 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 RBMX2P4-201ENST00000441256 376 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AL359073.1-201ENST00000448036 403 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC006480.1-201ENST00000449887 378 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC140076.1-201ENST00000449897 361 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 HMGB1P22-201ENST00000505315 124 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC007016.1-201ENST00000512110 244 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 RNU2-10P-201ENST00000516375 211 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 RNA5SP309-201ENST00000516670 106 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 RN7SKP66-201ENST00000516681 231 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 MTCYBP41-201ENST00000528913 1123 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC128657.1-201ENST00000549459 145 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC009117.1-201ENST00000563948 554 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 SNORA59B-202ENST00000578183 701 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 MIR4293-201ENST00000584305 78 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AL022099.1-201ENST00000604551 712 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC007363.1-201ENST00000604736 620 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC015967.1-201ENST00000619893 476 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AL356321.1-201ENST00000621360 228 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 MIR3688-2-201ENST00000636963 87 ntBASIC4.48□□□□□ -1.69
MKS1Q9NXB0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.48□□□□□ -1.69
MKS1Q9NXB0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 RNY4P14-201ENST00000363656 96 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 RNU6-39P-201ENST00000384344 107 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 RNU6-171P-201ENST00000384354 107 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC119751.6-201ENST00000416712 186 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AL807761.1-201ENST00000417622 171 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 HMGB3P20-201ENST00000417997 600 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 TOMM22P1-201ENST00000418578 312 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AL353193.1-201ENST00000421444 268 ntBASIC4.47□□□□□ -1.69
MKS1Q9NXB0 AC000111.3-201ENST00000433478 193 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms