Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.66□□□□□ -1.98
CLN6Q9NWW5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CLN6Q9NWW5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.98
CLN6Q9NWW5 AC233263.6-201ENST00000631132 1963 ntBASIC2.65□□□□□ -1.98
CLN6Q9NWW5 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.65□□□□□ -1.98
CLN6Q9NWW5 MCTS2P-201ENST00000394552 546 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AL136372.1-201ENST00000403060 228 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 RNU2-72P-201ENST00000411175 163 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 Z75741.1-201ENST00000446793 314 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 VN1R10P-201ENST00000447106 875 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 MRPL42P4-201ENST00000453267 443 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AC092757.1-201ENST00000467293 467 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 RPL9P33-201ENST00000484311 566 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 RN7SKP272-201ENST00000516988 232 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AC027309.2-201ENST00000520566 192 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 OR10V3P-201ENST00000525712 725 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AL136520.1-202ENST00000555494 763 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 LARP7P2-201ENST00000575306 125 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AC091946.2-201ENST00000606105 291 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 BX323046.1-201ENST00000610145 535 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AL356585.4-201ENST00000623078 1229 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AL355596.1-201ENST00000565399 3996 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 GABRG2-229ENST00000641017 3628 ntBASIC2.65□□□□□ -1.99
CLN6Q9NWW5 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.65□□□□□ -1.99
CLN6Q9NWW5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 RNU6-799P-201ENST00000363567 107 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 MIR1289-1-201ENST00000408836 144 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 RPL7P30-201ENST00000420888 709 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AL139281.1-201ENST00000422120 335 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 PSMA6P3-201ENST00000428242 164 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AC097713.2-201ENST00000430199 356 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 EZH2P1-201ENST00000431167 291 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AC008571.1-201ENST00000467232 300 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 RN7SL297P-201ENST00000483161 293 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 SNORA9.3-201ENST00000516383 129 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AC010653.1-201ENST00000571108 881 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 VN1R87P-201ENST00000596706 487 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 MTATP6P2-201ENST00000603319 678 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 AP002826.1-201ENST00000608835 315 ntBASIC2.64□□□□□ -1.99
CLN6Q9NWW5 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.64□□□□□ -1.99
CLN6Q9NWW5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AC091564.4-201ENST00000533934 2194 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 Y_RNA.110-201ENST00000363220 99 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 U8.9-201ENST00000365667 134 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 SUGT1P1-201ENST00000379514 476 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 RNU6-1027P-201ENST00000383998 107 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 RNU6-1300P-201ENST00000391046 108 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AL031121.1-201ENST00000406553 254 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 RPL5P18-201ENST00000406671 891 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 ATG3P1-201ENST00000419507 911 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 SAR1AP4-201ENST00000429225 591 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AL159987.2-201ENST00000432754 307 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AC006028.1-201ENST00000438379 402 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AL359385.1-201ENST00000456509 365 ntBASIC2.63□□□□□ -1.99
CLN6Q9NWW5 AL031183.1-201ENST00000457667 207 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms