Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC006020.1-201ENST00000420179 1854 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 SFR1P1-201ENST00000403720 688 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 RPS4XP7-201ENST00000406274 780 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 AC010385.1-201ENST00000412374 256 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 MTATP6P11-201ENST00000428071 670 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 SNRPEP4-201ENST00000435815 279 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 RPL21P2-201ENST00000440049 481 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 RNA5SP281-201ENST00000516504 135 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 OSBPL9P3-201ENST00000534523 595 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 AC084033.1-201ENST00000550830 633 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 AC009268.1-201ENST00000561352 1203 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 AP003122.6-201ENST00000623831 495 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CISHQ9NSE2 AC097714.1-201ENST00000511272 1647 ntBASIC2.46□□□□□ -2.02
CISHQ9NSE2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
CISHQ9NSE2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 AC006378.2-201ENST00000623178 2476 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CISHQ9NSE2 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CISHQ9NSE2 RNU6-1243P-201ENST00000364028 107 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 SNORA26.7-201ENST00000391288 122 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 AL591416.1-201ENST00000404015 867 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 RNA5SP38-201ENST00000410750 119 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 AC107081.1-201ENST00000414975 361 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 RPL7P10-201ENST00000417407 739 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 HIGD1AP2-201ENST00000446367 280 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 AC128713.1-201ENST00000471495 306 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 AC105914.1-201ENST00000511798 226 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CISHQ9NSE2 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 AL512310.1-201ENST00000548639 172 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 AADACP1-206ENST00000561502 1193 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 OR4G1P-201ENST00000588632 938 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 MIR6766-201ENST00000622641 72 ntBASIC2.45□□□□□ -2.02
CISHQ9NSE2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
CISHQ9NSE2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CISHQ9NSE2 MTND5P28-201ENST00000438005 1594 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CISHQ9NSE2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 OR5H15-201ENST00000383696 930 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 RNU6-837P-201ENST00000391056 108 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 RNA5SP492-201ENST00000411330 114 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 RPS6P14-201ENST00000425165 719 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 XKRYP6-201ENST00000440468 1116 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 XKRYP3-201ENST00000442113 1116 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CISHQ9NSE2 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 OR5H5P-201ENST00000503164 928 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 RPL7L1P13-201ENST00000511702 739 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 HSPE1P20-201ENST00000538133 289 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 AC024224.1-201ENST00000538284 609 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 DNAJC8P1-201ENST00000554535 372 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 COX6CP3-201ENST00000580869 223 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 AL009028.1-201ENST00000604895 802 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 AC018755.4-201ENST00000619715 454 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.44□□□□□ -2.02
CISHQ9NSE2 AC091564.4-201ENST00000533934 2194 ntBASIC2.44□□□□□ -2.02
CISHQ9NSE2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CISHQ9NSE2 RNU6-1027P-201ENST00000383998 107 ntBASIC2.43□□□□□ -2.02
CISHQ9NSE2 RNU6-152P-201ENST00000384037 107 ntBASIC2.43□□□□□ -2.02
CISHQ9NSE2 RAP1BP1-201ENST00000412709 553 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms