Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 FAM60DP-201ENST00000524174 632 ntBASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 AP001804.3-201ENST00000525146 880 ntBASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 AL133153.1-201ENST00000557756 303 ntBASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 AC023575.1-201ENST00000580510 358 ntBASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 AC106900.2-201ENST00000604994 317 ntBASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 CTHRC1P1-201ENST00000605383 469 ntBASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 AC092807.2-201ENST00000609367 243 ntBASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 FAM27B-201ENST00000610601 213 ntBASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 AC011155.2-201ENST00000623202 216 ntBASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 AL078596.1-201ENST00000624856 447 ntBASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZFYVE28Q9HCC9 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 Y_RNA.146-201ENST00000363549 102 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 RNU6-1078P-201ENST00000364522 103 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 RNU4-14P-201ENST00000410858 122 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 RPL7L1P10-201ENST00000427790 463 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 RPL36AP6-201ENST00000435770 321 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AC016696.1-201ENST00000446949 318 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AC091180.1-201ENST00000462104 372 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 SCARNA22-201ENST00000503991 125 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AC016065.2-201ENST00000514530 444 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AL133271.1-201ENST00000538229 291 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AL163153.1-201ENST00000554223 283 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AL390240.1-201ENST00000612950 384 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AP001486.3-201ENST00000615334 372 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AP001005.3-201ENST00000622049 129 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AL136313.1-201ENST00000624804 202 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 STX3-208ENST00000641815 3236 ntBASIC5.67□□□□□ -1.5
ZFYVE28Q9HCC9 AC090229.1-201ENST00000590983 1609 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 MAPK10-328ENST00000641553 4009 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 RNA5SP515-201ENST00000364570 118 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 Y_RNA.378-201ENST00000365652 113 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 Y_RNA.395-201ENST00000383945 109 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 MIR548K-201ENST00000408406 116 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 MIR548F5-201ENST00000408421 86 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 RPS15AP40-201ENST00000419621 391 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AC092162.1-201ENST00000432828 434 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 CEACAMP1-201ENST00000434624 1035 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 HMGB3P11-201ENST00000440127 604 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AL162395.1-201ENST00000457882 422 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 RNU7-152P-201ENST00000458982 64 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 Y_RNA.654-201ENST00000497848 106 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 RNU6-273P-201ENST00000516937 96 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AP000763.2-201ENST00000540641 163 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AL352979.3-201ENST00000553515 247 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AL118558.2-201ENST00000556294 238 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 MIR3942-201ENST00000585264 109 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 AC124303.1-201ENST00000605703 360 ntBASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ZFYVE28Q9HCC9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms