Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AL079343.1-201ENST00000572358 1771 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC244517.1-201ENST00000606030 2086 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 RPL32P3-201ENST00000359025 275 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AL049693.1-201ENST00000402760 611 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC245052.5-201ENST00000416320 649 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 MTATP6P27-201ENST00000416987 621 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 MTND4LP10-201ENST00000435146 291 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 BX322784.1-201ENST00000455793 1077 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 MEMO1P3-201ENST00000459811 302 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC091179.1-201ENST00000461606 579 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC026979.1-201ENST00000492525 396 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 RPL7P23-201ENST00000493874 747 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AL139099.1-201ENST00000497398 403 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 HMGB1P22-201ENST00000505315 124 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC004062.1-201ENST00000509926 645 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 MIR2116-201ENST00000517221 80 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC020914.6-201ENST00000594327 272 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 VN1R82P-201ENST00000601481 356 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC006539.2-201ENST00000601729 572 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC055876.5-201ENST00000605667 259 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AL607023.1-201ENST00000620045 248 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 PLCE1P1-201ENST00000622094 305 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 AC079228.1-201ENST00000624774 1049 ntBASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VIPAS39Q9H9C1 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 RNU6-1214P-201ENST00000363650 109 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 SNORA4.1-201ENST00000364263 144 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 SNORD51-201ENST00000384320 80 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 MIR181B1-201ENST00000385240 110 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 MIR591-201ENST00000385290 95 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AL031121.1-201ENST00000406553 254 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 ATP5A1P2-201ENST00000412323 255 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 TPMTP2-201ENST00000414372 726 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC010099.3-201ENST00000423896 409 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 RPL21P66-201ENST00000426566 466 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 NEK4P1-201ENST00000433383 879 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 Z95327.1-201ENST00000446082 482 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 TPT1P12-201ENST00000448968 492 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 GSTA11P-201ENST00000452866 669 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 RN7SL499P-201ENST00000481141 276 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 RPS4XP13-201ENST00000483219 789 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 FAM172BP-201ENST00000487497 1089 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 COX7A2P2-201ENST00000505291 250 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC093677.1-201ENST00000514414 678 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC109635.4-202ENST00000531666 412 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC084824.1-201ENST00000550917 1005 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AL354943.1-201ENST00000572103 781 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC053481.4-201ENST00000583164 216 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 BBIP1P1-201ENST00000602999 279 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 SNORA51-201ENST00000606420 132 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 MIR378J-201ENST00000611988 109 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC021755.4-201ENST00000616620 456 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AL136981.2-201ENST00000617319 734 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 MIR6758-201ENST00000620653 63 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AL354798.1-201ENST00000622505 329 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AC119674.1-207ENST00000641355 633 ntBASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VIPAS39Q9H9C1 AP001350.1-201ENST00000601906 1524 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms