Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC007619.2-201ENST00000605743 379 ntBASIC3.08□□□□□ -1.92
NXF3Q9H4D5 AC084824.4-201ENST00000620106 731 ntBASIC3.08□□□□□ -1.92
NXF3Q9H4D5 AC010608.3-201ENST00000625048 527 ntBASIC3.08□□□□□ -1.92
NXF3Q9H4D5 AC099654.9-201ENST00000637055 678 ntBASIC3.08□□□□□ -1.92
NXF3Q9H4D5 AL355596.1-201ENST00000565399 3996 ntBASIC3.08□□□□□ -1.92
NXF3Q9H4D5 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.08□□□□□ -1.92
NXF3Q9H4D5 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NXF3Q9H4D5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NXF3Q9H4D5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AC009487.2-201ENST00000420969 6821 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 RNU6-1181P-201ENST00000384191 106 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 RPL31P1-201ENST00000398116 372 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 TMSB4XP8-201ENST00000402089 135 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AL031121.1-201ENST00000406553 254 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 TMSB4XP6-201ENST00000415187 135 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 BOLA3P4-201ENST00000418151 400 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AL139281.1-201ENST00000422120 335 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AC233981.1-201ENST00000423224 461 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 TMSB4XP1-201ENST00000424567 135 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 DPPA2P1-201ENST00000428060 556 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 MTCYBP15-201ENST00000433123 1127 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 PTGES3P1-201ENST00000439531 483 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AC244505.3-201ENST00000454598 187 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 NECAP1P2-201ENST00000455668 727 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 RPL21P41-201ENST00000459863 264 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 RPL21P8-201ENST00000465083 535 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AC005951.1-201ENST00000576706 485 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AC245884.10-201ENST00000597355 337 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 RPL12P50-201ENST00000603116 116 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 RPAP2P1-201ENST00000603626 1168 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 AC016597.2-201ENST00000613256 341 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 VN1R74P-201ENST00000613259 503 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 VN1R7P-201ENST00000619242 903 ntBASIC3.07□□□□□ -1.92
NXF3Q9H4D5 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
NXF3Q9H4D5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 AC062016.1-201ENST00000355719 319 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 UBE2V1P2-201ENST00000397758 440 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 RN7SKP58-201ENST00000411010 305 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 RPS7P9-201ENST00000414704 586 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 TOMM22P1-201ENST00000418578 312 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 AC027644.1-201ENST00000419595 298 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 OFD1P18Y-201ENST00000420889 959 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 AC012498.1-201ENST00000424037 437 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 USP9YP36-201ENST00000424581 829 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 RPL36P19-201ENST00000430744 301 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 RPS15AP1-201ENST00000457423 391 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 snoU13.3-201ENST00000459441 104 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 AC006483.1-201ENST00000487308 313 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 AC008837.1-201ENST00000511513 412 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 RPL23AP94-201ENST00000512518 302 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 RNU6-276P-201ENST00000516114 96 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 RNA5SP380-201ENST00000517190 98 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.06□□□□□ -1.92
NXF3Q9H4D5 NDUFS5P6-201ENST00000529136 295 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 OR4A45P-201ENST00000529954 901 ntBASIC3.06□□□□□ -1.92
NXF3Q9H4D5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms