Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 DDX43P2-201ENST00000604753 1354 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBQLN3Q9H347 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.35□□□□□ -1.87
UBQLN3Q9H347 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 SGO1P2-201ENST00000429458 1589 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 RNU6-343P-201ENST00000364709 104 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 RNU6-253P-201ENST00000384730 105 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 RNA5SP171-201ENST00000391071 115 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 RSL24D1P4-201ENST00000400938 484 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AL591034.1-201ENST00000407447 340 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 MIR320C1-201ENST00000408566 88 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC083875.1-201ENST00000419509 405 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 YPEL5P1-201ENST00000419731 367 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AL022400.1-201ENST00000423946 935 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC006989.1-201ENST00000427212 131 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 TXNL1P1-201ENST00000429528 554 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC091286.1-201ENST00000431233 461 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 MTND1P31-201ENST00000449206 961 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 PAXBP1P1-201ENST00000449315 447 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC004801.2-202ENST00000463559 283 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC021146.5-201ENST00000503544 545 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 RN7SKP18-201ENST00000516005 275 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 COX6CP8-201ENST00000522620 226 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 UBTFL10-201ENST00000528532 562 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 LRRC34P1-201ENST00000542742 915 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 FAM60BP-201ENST00000578364 658 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 MIR92B-201ENST00000607575 96 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AL732372.2-225ENST00000642124 456 ntBASIC3.34□□□□□ -1.87
UBQLN3Q9H347 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
UBQLN3Q9H347 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
UBQLN3Q9H347 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.34□□□□□ -1.88
UBQLN3Q9H347 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.34□□□□□ -1.88
UBQLN3Q9H347 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC002546.1-201ENST00000588041 2504 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 RPL7P26-201ENST00000333817 754 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 SNORA71.3-201ENST00000362582 128 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 RNU6-173P-201ENST00000364215 104 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 RNU6-777P-201ENST00000364265 104 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 MIR670-201ENST00000390142 98 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 TAS2R15P-201ENST00000390674 928 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 HMGN2P20-201ENST00000437531 273 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AL117351.1-201ENST00000438864 766 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 SNORD105B-201ENST00000458770 79 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC012181.1-201ENST00000479895 423 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC106707.2-201ENST00000484182 374 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC006499.5-201ENST00000505037 514 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 SLC25A15P5-201ENST00000508033 253 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC104619.4-201ENST00000510773 249 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC024589.1-201ENST00000512207 263 ntBASIC3.33□□□□□ -1.88
UBQLN3Q9H347 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms