Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 RN7SL753P-201ENST00000581238 290 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 AL606834.2-201ENST00000602954 668 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 AC005332.10-201ENST00000612725 619 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.39□□□□□ -2.03
VCX3BQ9H321 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
VCX3BQ9H321 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.39□□□□□ -2.03
VCX3BQ9H321 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.39□□□□□ -2.03
VCX3BQ9H321 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VCX3BQ9H321 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VCX3BQ9H321 CKAP2P1-201ENST00000555477 2049 ntBASIC2.39□□□□□ -2.03
VCX3BQ9H321 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 RNA5SP37-201ENST00000365420 130 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 RNU4-52P-201ENST00000384209 138 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 SNORA41-201ENST00000384675 132 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 MIR490-201ENST00000384865 128 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 MIR767-201ENST00000390228 109 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 RNU6ATAC-201ENST00000408749 126 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 RNU6-712P-201ENST00000410558 100 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC010385.1-201ENST00000412374 256 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC245052.5-201ENST00000416320 649 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 RPL7P44-201ENST00000424827 742 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AL365496.1-201ENST00000426885 215 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 NDUFB4P6-201ENST00000436819 366 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC097499.1-201ENST00000444277 208 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC008280.2-201ENST00000455473 307 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 PNPLA4P1-201ENST00000458328 305 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 RPL23AP45-201ENST00000476406 468 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 RNA5SP282-201ENST00000516355 108 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC004944.1-201ENST00000517807 3059 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC026403.1-201ENST00000518938 295 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC007954.1-201ENST00000554198 494 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 MED28P6-201ENST00000558776 231 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC023824.2-201ENST00000566185 400 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 ADAM3B-201ENST00000569937 840 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 RPL23AP84-201ENST00000571193 464 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 MTCO3P22-201ENST00000603219 784 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AP005137.2-201ENST00000609238 400 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC004852.3-201ENST00000614131 326 ntBASIC2.38□□□□□ -2.03
VCX3BQ9H321 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.38□□□□□ -2.03
VCX3BQ9H321 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 RNU6-821P-201ENST00000390995 107 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AP002784.2-201ENST00000397300 549 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 RAB9AP3-201ENST00000412737 573 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 HMGN2P38-201ENST00000423806 265 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 AL358075.3-201ENST00000426289 226 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AC016712.1-201ENST00000431088 378 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 RAB9AP1-201ENST00000449393 573 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AC087588.1-201ENST00000462203 316 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 AC090255.1-201ENST00000495779 349 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 SUMO1P1-201ENST00000497904 306 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 MIR514B-201ENST00000516774 80 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AP003102.1-201ENST00000525638 661 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AC090888.1-201ENST00000561335 1141 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 AL023583.1-201ENST00000607518 1143 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AL513477.2-201ENST00000607858 568 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AC027309.3-201ENST00000623419 351 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 MTND2P41-201ENST00000637599 773 ntBASIC2.37□□□□□ -2.03
VCX3BQ9H321 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
VCX3BQ9H321 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VCX3BQ9H321 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VCX3BQ9H321 RPS3AP9-201ENST00000417027 792 ntBASIC2.36□□□□□ -2.03
VCX3BQ9H321 ATP5F1P1-201ENST00000433775 569 ntBASIC2.36□□□□□ -2.03
VCX3BQ9H321 GPM6BP3-201ENST00000442797 145 ntBASIC2.36□□□□□ -2.03
VCX3BQ9H321 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 TTC39CP1-201ENST00000512513 755 ntBASIC2.36□□□□□ -2.03
VCX3BQ9H321 AC104057.1-201ENST00000515547 497 ntBASIC2.36□□□□□ -2.03
VCX3BQ9H321 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 ATP5F1P5-201ENST00000526403 760 ntBASIC2.36□□□□□ -2.03
VCX3BQ9H321 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.36□□□□□ -2.03
VCX3BQ9H321 AC093227.2-201ENST00000589357 285 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms