Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 DPRXP5-201ENST00000604662 539 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 U6.101-201ENST00000637707 76 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 AL031985.3-201ENST00000565390 2449 ntBASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.89□□□□□ -1.79
ZNF541Q9H0D2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC008725.1-201ENST00000605123 2263 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 DCAF13P1-201ENST00000495256 1330 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 Y_RNA.493-201ENST00000384422 102 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AL121972.1-201ENST00000402023 252 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AL391417.1-201ENST00000404100 426 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC068533.2-201ENST00000411872 306 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 MTCYBP24-201ENST00000420387 1106 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 MTCYBP34-201ENST00000439552 670 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 SNORD108-201ENST00000459332 71 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC092045.1-201ENST00000495716 1231 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC108078.3-201ENST00000502633 489 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 RN7SKP132-201ENST00000516001 208 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 RNY4P37-201ENST00000516225 96 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 PDCL2P2-201ENST00000533651 189 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC125611.1-201ENST00000549563 229 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 H3F3AP1-201ENST00000559984 334 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC015917.1-201ENST00000579654 510 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 MAGOH2P-202ENST00000584384 429 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 NIFKP6-201ENST00000598115 845 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 NRBF2P5-201ENST00000603087 788 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC008147.4-201ENST00000617570 1204 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC073968.1-201ENST00000618594 637 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC091304.6-201ENST00000619761 202 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC009318.4-201ENST00000620496 486 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC022149.2-201ENST00000621061 203 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 CYP3A51P-201ENST00000633513 256 ntBASIC3.88□□□□□ -1.79
ZNF541Q9H0D2 CR381670.1-201ENST00000624291 1693 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 MTND5P3-201ENST00000438536 1800 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 RNU4-82P-201ENST00000362443 140 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 MIR1284-201ENST00000408337 120 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 RNA5SP229-201ENST00000410809 99 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 RPS25P9-201ENST00000435591 252 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 RPL23AP74-201ENST00000437246 471 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 MTND2P20-201ENST00000440805 661 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AL135938.1-201ENST00000443141 297 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AC098826.2-201ENST00000452011 651 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 OR5AP1P-201ENST00000529730 940 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AL121576.1-201ENST00000556055 276 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 MTND3P12-201ENST00000559068 328 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AC107954.1-201ENST00000565906 727 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 MIR4319-201ENST00000577285 85 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 BNIP3P24-201ENST00000593398 557 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 C2orf27A-204ENST00000623058 969 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AC006065.5-201ENST00000623427 349 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AC004943.3-201ENST00000624116 600 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AC007490.1-201ENST00000624321 703 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 MIR1322-201ENST00000638013 71 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 AL513302.2-201ENST00000562313 1842 ntBASIC3.87□□□□□ -1.79
ZNF541Q9H0D2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms