Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.42□□□□□ -1.86
CCSER1Q9C0I3 AL139022.2-201ENST00000606934 443 ntBASIC3.42□□□□□ -1.86
CCSER1Q9C0I3 AC006213.4-201ENST00000616184 634 ntBASIC3.42□□□□□ -1.86
CCSER1Q9C0I3 AC022306.3-201ENST00000619930 550 ntBASIC3.42□□□□□ -1.86
CCSER1Q9C0I3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.42□□□□□ -1.86
CCSER1Q9C0I3 MTCO1P23-201ENST00000415223 1526 ntBASIC3.42□□□□□ -1.86
CCSER1Q9C0I3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.42□□□□□ -1.86
CCSER1Q9C0I3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCSER1Q9C0I3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCSER1Q9C0I3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 SNORD51-201ENST00000384320 80 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 MIR506-201ENST00000384998 124 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 MCTS2P-201ENST00000394552 546 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 RN7SKP220-201ENST00000410611 288 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 RPS7P9-201ENST00000414704 586 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 RAC1P8-201ENST00000427086 527 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 MTCO1P3-201ENST00000429327 192 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 MTND4LP10-201ENST00000435146 291 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 PNPLA4P1-201ENST00000458328 305 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 HMGB1P25-201ENST00000468402 607 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 HMGN2P13-201ENST00000476476 274 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC006445.1-201ENST00000491925 405 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC096751.1-202ENST00000502691 1067 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC008427.1-201ENST00000503102 655 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 DSTNP2-201ENST00000504533 515 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 KLHL2P1-201ENST00000508691 521 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC023825.1-201ENST00000566704 1030 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 MIR4325-201ENST00000583049 90 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC107294.3-201ENST00000609211 526 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 RNU6-1192P-201ENST00000612197 107 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 RNU6-489P-201ENST00000618289 107 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AC095031.1-201ENST00000623685 672 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AP003485.1-201ENST00000625093 753 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 OR5BR1P-201ENST00000524992 1330 ntBASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CCSER1Q9C0I3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.4□□□□□ -1.86
CCSER1Q9C0I3 RNU6-173P-201ENST00000364215 104 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 MIR620-201ENST00000385232 95 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 RNU6-1000P-201ENST00000391066 106 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 SNRPEP4-201ENST00000435815 279 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 RPL23AP74-201ENST00000437246 471 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 PTGES3P1-201ENST00000439531 483 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AL121871.1-201ENST00000443413 436 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 RPL23AP31-201ENST00000456160 467 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 FCF1P6-201ENST00000456841 595 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 RPL7P5-201ENST00000471472 736 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 MTATP6P9-201ENST00000515039 680 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 RNU6-27P-201ENST00000516146 107 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 SNORA31.8-201ENST00000516327 108 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 NDUFS5P6-201ENST00000529136 295 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC122134.1-202ENST00000569111 1201 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC005951.1-201ENST00000576706 485 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC091946.2-201ENST00000606105 291 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AF129408.1-201ENST00000608767 431 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AL110115.1-201ENST00000614396 364 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC007318.2-201ENST00000620999 243 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC091953.5-201ENST00000622919 233 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AP001002.2-201ENST00000625137 386 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 AC093908.1-201ENST00000623125 8092 ntBASIC3.4□□□□□ -1.87
CCSER1Q9C0I3 MTND5P27-201ENST00000428871 1720 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 MIR22-201ENST00000362190 85 ntBASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCSER1Q9C0I3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms