Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 Y_RNA.307-201ENST00000365022 117 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 RNU6-26P-201ENST00000383985 107 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 RNU6-890P-201ENST00000384121 107 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 UBE2V1P2-201ENST00000397758 440 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AL645733.1-201ENST00000402250 217 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 MIR1182-201ENST00000408363 97 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 HMGN1P24-201ENST00000412282 298 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 DDX39BP1-205ENST00000422507 192 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AL451139.1-201ENST00000434718 346 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 RPS26P56-201ENST00000444468 240 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AC020550.1-201ENST00000447385 163 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AL162395.1-201ENST00000457882 422 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AC023424.1-201ENST00000496058 459 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 RN7SL808P-201ENST00000496066 299 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AP000827.1-201ENST00000527814 258 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 COX6CP3-201ENST00000580869 223 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AC008814.1-201ENST00000603797 406 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 AC243654.2-201ENST00000612843 443 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 MIR6730-201ENST00000622213 67 ntBASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSBP3Q9BWW4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 SNORD3E-201ENST00000362899 217 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 Y_RNA.153-201ENST00000363615 91 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 SNORA58B-201ENST00000364259 136 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RNA5SP223-201ENST00000365174 120 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RNU1-74P-201ENST00000384108 171 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RNU6-209P-201ENST00000384118 107 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RNU6-1026P-201ENST00000384465 108 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 MIR589-201ENST00000385238 99 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AL359643.1-201ENST00000404109 423 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RNU4-25P-201ENST00000410569 230 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 EI24P4-201ENST00000423683 1078 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RSL24D1P6-201ENST00000426934 401 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AL669831.1-202ENST00000428504 417 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RPL7AP49-201ENST00000429522 581 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RPL36P19-201ENST00000430744 301 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AL591438.1-201ENST00000433508 581 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RPL19P16-201ENST00000433839 588 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 FTH1P1-201ENST00000437933 532 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 HMGB1P12-201ENST00000438594 598 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RPL23AP89-201ENST00000439324 255 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC092647.2-201ENST00000452998 253 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AP001992.1-205ENST00000462248 379 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC097484.1-201ENST00000471148 389 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RN7SL97P-201ENST00000486780 299 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC068305.1-201ENST00000497406 726 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC004980.4-201ENST00000513375 203 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RNU6-513P-201ENST00000516104 104 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RN7SKP147-201ENST00000517154 244 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 Y_RNA.721-201ENST00000517207 102 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RN7SKP40-201ENST00000517211 242 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC024224.1-201ENST00000538284 609 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC113195.1-201ENST00000579952 141 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 FAM157A-202ENST00000615155 405 ntBASIC4.3□□□□□ -1.72
SSBP3Q9BWW4 AC011155.2-201ENST00000623202 216 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms