Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC126177.3-201ENST00000551839 688 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC011611.1-201ENST00000552179 197 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 NCAPGP2-201ENST00000557911 754 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 MTATP6P24-201ENST00000576835 677 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC053481.3-201ENST00000577881 843 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 BNIP3P33-201ENST00000598912 569 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 VN1R82P-201ENST00000601481 356 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC093424.1-201ENST00000604999 338 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC128687.1-201ENST00000605304 619 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC080013.4-201ENST00000607624 649 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC079395.3-201ENST00000615161 484 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 AC025588.4-201ENST00000615802 908 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 U6.105-201ENST00000637379 88 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
CCM2Q9BSQ5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC017071.1-201ENST00000564407 2204 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 RNA5SP72-201ENST00000364442 117 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 SNORA51.2-201ENST00000364595 132 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 RNU6-157P-201ENST00000383957 107 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 MIR490-201ENST00000384865 128 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 Z99755.1-201ENST00000414048 380 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC092447.6-201ENST00000414578 210 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 TOMM22P1-201ENST00000418578 312 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 HSPE1P28-201ENST00000443139 211 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC008264.1-201ENST00000447612 367 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC010468.1-201ENST00000461022 817 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC097493.1-201ENST00000463958 372 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 RPL21P104-201ENST00000464143 478 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC112198.1-201ENST00000505369 1220 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 MTND4LP22-201ENST00000508209 276 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 RNU6-150P-201ENST00000516237 95 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 RN7SKP287-201ENST00000516546 266 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC107934.2-201ENST00000518653 310 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 DEFB131D-201ENST00000526803 184 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC023050.2-201ENST00000544968 387 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC011602.1-201ENST00000546484 331 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AL121603.1-201ENST00000553815 142 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 DUXAP1-201ENST00000556632 463 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC087465.1-201ENST00000560574 245 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 MIR3944-201ENST00000581277 108 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 XIAPP1-201ENST00000603162 600 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC103881.1-201ENST00000603476 538 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 ELOCP35-201ENST00000604289 336 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC055876.5-201ENST00000605667 259 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC087683.2-201ENST00000611384 326 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AC004009.2-201ENST00000623016 728 ntBASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCM2Q9BSQ5 AL353746.1-201ENST00000566293 6881 ntBASIC3.34□□□□□ -1.88
CCM2Q9BSQ5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.34□□□□□ -1.88
CCM2Q9BSQ5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CCM2Q9BSQ5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 AC110774.1-201ENST00000623567 2018 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 RNU6-600P-201ENST00000362524 99 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 RNU1-33P-201ENST00000364249 162 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 AP002088.1-201ENST00000382740 395 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 AL031679.1-201ENST00000400616 525 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 RNU6-55P-201ENST00000411092 107 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 RNU6-954P-201ENST00000411355 107 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 AC126124.2-201ENST00000413542 321 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 HSFY4P-201ENST00000415994 1181 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 MTATP6P27-201ENST00000416987 621 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 AL590233.1-201ENST00000430017 456 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 AC097713.2-201ENST00000430199 356 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 AL590103.1-201ENST00000434488 307 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 ANKRD26P4-201ENST00000455755 950 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 RPL21P10-201ENST00000463521 490 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 RPS4XP10-201ENST00000465034 731 ntBASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCM2Q9BSQ5 RPL32P34-201ENST00000486380 400 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms