Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX3Q99909 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.2□□□□□ -1.9
SSX3Q99909 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX3Q99909 AL596327.1-201ENST00000603629 213 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 AL133507.1-201ENST00000605269 557 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX3Q99909 TUG1_1.1-201ENST00000610654 145 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 AL136981.2-201ENST00000617319 734 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 MIR6076-201ENST00000617521 113 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.2□□□□□ -1.9
SSX3Q99909 AC034229.5-201ENST00000624258 185 ntBASIC3.2□□□□□ -1.9
SSX3Q99909 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX3Q99909 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX3Q99909 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.2□□□□□ -1.9
SSX3Q99909 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SSX3Q99909 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSX3Q99909 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSX3Q99909 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.19□□□□□ -1.9
SSX3Q99909 MTND5P27-201ENST00000428871 1720 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSX3Q99909 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.19□□□□□ -1.9
SSX3Q99909 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSX3Q99909 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSX3Q99909 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SSX3Q99909 RNU6-343P-201ENST00000364709 104 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSX3Q99909 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSX3Q99909 RNU6-213P-201ENST00000384051 104 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 RPL32P23-201ENST00000397237 405 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 SNORA11-201ENST00000408789 128 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 RN7SKP159-201ENST00000410657 292 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 RPL7AP73-201ENST00000413490 353 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AC083875.1-201ENST00000419509 405 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 BEND7P1-201ENST00000422058 457 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX3Q99909 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.19□□□□□ -1.9
SSX3Q99909 AL121871.1-201ENST00000443413 436 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSX3Q99909 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX3Q99909 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX3Q99909 RPL23AP35-201ENST00000451906 501 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AC006539.3-201ENST00000454258 129 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AL359385.1-201ENST00000456509 365 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.19□□□□□ -1.9
SSX3Q99909 AC024589.1-201ENST00000512207 263 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX3Q99909 RNA5SP216-201ENST00000516111 123 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 RN7SKP60-201ENST00000516985 239 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 RNU1-45P-201ENST00000517191 141 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX3Q99909 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.19□□□□□ -1.9
SSX3Q99909 AC055876.1-202ENST00000567053 138 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AC034105.4-201ENST00000568304 277 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.19□□□□□ -1.9
SSX3Q99909 BNIP3P38-201ENST00000601117 544 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AC013444.2-201ENST00000603317 787 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AC093424.1-201ENST00000604999 338 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AP002826.1-201ENST00000608835 315 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AL139418.1-201ENST00000613613 177 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AL591424.2-201ENST00000617023 128 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AL354798.1-201ENST00000622505 329 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 TAB3P1-202ENST00000452645 1634 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AC011477.1-204ENST00000623416 1325 ntBASIC3.19□□□□□ -1.9
SSX3Q99909 AC090740.1-201ENST00000623193 2262 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SSX3Q99909 AL161781.1-201ENST00000354277 403 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 RNA5SP399-201ENST00000364003 117 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 RNU6-289P-201ENST00000364093 107 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 SAR1AP2-201ENST00000392696 594 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 CYCSP19-201ENST00000411715 316 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.18□□□□□ -1.9
SSX3Q99909 Z97055.1-201ENST00000419730 712 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 TMEM167AP1-201ENST00000423409 219 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 RPL7P46-201ENST00000425129 740 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX3Q99909 TXNL1P1-201ENST00000429528 554 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX3Q99909 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.18□□□□□ -1.9
SSX3Q99909 AC024082.2-201ENST00000434771 238 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX3Q99909 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.18□□□□□ -1.9
SSX3Q99909 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.18□□□□□ -1.9
SSX3Q99909 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX3Q99909 AL590664.1-201ENST00000448065 339 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 MTND1P31-201ENST00000449206 961 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 PAXBP1P1-201ENST00000449315 447 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.18□□□□□ -1.9
SSX3Q99909 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX3Q99909 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.18□□□□□ -1.9
SSX3Q99909 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX3Q99909 RPL21P11-201ENST00000461458 483 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 AC104472.2-201ENST00000469035 601 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 MTND2P14-201ENST00000482139 351 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 AC021146.5-201ENST00000503544 545 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.18□□□□□ -1.9
SSX3Q99909 TXNP6-201ENST00000510190 310 ntBASIC3.18□□□□□ -1.9
SSX3Q99909 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SSX3Q99909 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms