Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LITAFQ99732 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LITAFQ99732 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
LITAFQ99732 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
LITAFQ99732 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 RN7SKP184-201ENST00000362348 333 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 Y_RNA.22-201ENST00000362492 102 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 Y_RNA.86-201ENST00000363020 111 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 Y_RNA.367-201ENST00000365544 101 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
LITAFQ99732 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.97□□□□□ -1.93
LITAFQ99732 RNU1-89P-201ENST00000384592 164 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 RNU6-606P-201ENST00000384721 111 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 MIR153-1-201ENST00000384914 90 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 MIR558-201ENST00000384920 94 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC2.97□□□□□ -1.93
LITAFQ99732 AL354719.1-201ENST00000406535 843 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC2.97□□□□□ -1.93
LITAFQ99732 RNU4-78P-201ENST00000410940 126 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 RNU6-516P-201ENST00000411381 104 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 GJA6P-201ENST00000415117 1042 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 OR51A5P-201ENST00000415429 942 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC2.97□□□□□ -1.93
LITAFQ99732 AL513185.2-201ENST00000425543 193 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 RPL7L1P9-201ENST00000431298 745 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 RPL36AP39-201ENST00000445859 318 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 DDX3P2-201ENST00000446138 111 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 RPL29P29-201ENST00000448725 423 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AC010655.1-201ENST00000449336 292 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AC006480.1-201ENST00000449887 378 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.97□□□□□ -1.93
LITAFQ99732 CACYBPP2-201ENST00000453625 678 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.97□□□□□ -1.93
LITAFQ99732 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.97□□□□□ -1.93
LITAFQ99732 AL356010.1-201ENST00000456364 102 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 RPS27AP17-201ENST00000463344 455 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AC006517.1-201ENST00000480485 328 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AC233702.1-201ENST00000482905 502 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 RPL36AP41-201ENST00000493820 306 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LITAFQ99732 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC2.97□□□□□ -1.93
LITAFQ99732 AC106872.4-201ENST00000510050 523 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 SNORD27.1-201ENST00000516319 72 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.97□□□□□ -1.93
LITAFQ99732 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.97□□□□□ -1.93
LITAFQ99732 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.97□□□□□ -1.93
LITAFQ99732 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.97□□□□□ -1.93
LITAFQ99732 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.97□□□□□ -1.93
LITAFQ99732 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.97□□□□□ -1.93
LITAFQ99732 MIR4719-201ENST00000585233 84 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AL117336.2-201ENST00000602435 335 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AL031176.1-201ENST00000604554 466 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AC090948.1-201ENST00000607464 549 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC2.97□□□□□ -1.93
LITAFQ99732 AL359091.2-201ENST00000609303 556 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AC019193.2-201ENST00000610012 634 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 AL354950.2-201ENST00000617939 290 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 AL136313.1-201ENST00000624804 202 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
LITAFQ99732 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC2.97□□□□□ -1.93
LITAFQ99732 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LITAFQ99732 FAM91A3P-201ENST00000456826 2544 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LITAFQ99732 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LITAFQ99732 MTND4P29-201ENST00000503122 1372 ntBASIC2.97□□□□□ -1.93
LITAFQ99732 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
LITAFQ99732 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
LITAFQ99732 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LITAFQ99732 AC006020.1-201ENST00000420179 1854 ntBASIC2.96□□□□□ -1.93
LITAFQ99732 AL139811.1-201ENST00000424779 2299 ntBASIC2.96□□□□□ -1.93
LITAFQ99732 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
LITAFQ99732 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC2.96□□□□□ -1.93
LITAFQ99732 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
LITAFQ99732 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
LITAFQ99732 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.96□□□□□ -1.94
LITAFQ99732 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC2.96□□□□□ -1.94
LITAFQ99732 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
LITAFQ99732 AL592437.2-201ENST00000421655 2434 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 RPL7P26-201ENST00000333817 754 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 Y_RNA.61-201ENST00000362835 102 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 RN7SKP224-201ENST00000364140 325 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 RNA5SP455-201ENST00000365190 119 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 RNU4-48P-201ENST00000365559 182 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 RNU6-432P-201ENST00000384196 109 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 RNA5SP284-201ENST00000384547 118 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AC099535.1-201ENST00000408928 371 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 SNRPFP1-201ENST00000414761 252 ntBASIC2.96□□□□□ -1.94
LITAFQ99732 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms