Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 UBE2V1P6-201ENST00000430840 422 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC146507.2-201ENST00000460608 476 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC026414.1-201ENST00000504046 698 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 SNORA31.1-201ENST00000515993 133 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 SNORA31.5-201ENST00000516190 133 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 SNRPGP16-201ENST00000533275 226 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC008127.2-201ENST00000549925 1075 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 H3F3AP1-201ENST00000559984 334 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC023825.1-201ENST00000566704 1030 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 LARP7P2-201ENST00000575306 125 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC090666.1-201ENST00000578241 445 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 VN1R87P-201ENST00000596706 487 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AP001330.4-201ENST00000604350 154 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC005000.2-201ENST00000605468 310 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC092954.1-201ENST00000609121 445 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 ATP5A1P2-202ENST00000616464 443 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC090617.7-201ENST00000623952 126 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC080188.3-201ENST00000624842 748 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AC006927.2-201ENST00000639256 389 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.13□□□□□ -1.91
RPRD1AQ96P16 MTCO1P23-201ENST00000415223 1526 ntBASIC3.13□□□□□ -1.91
RPRD1AQ96P16 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 HMGB1P5-201ENST00000255320 642 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 RPL23AP57-201ENST00000332361 466 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 RNA5SP344-201ENST00000411081 104 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 MTATP6P4-201ENST00000427725 675 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC022018.1-201ENST00000430685 241 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 RSL24D1P3-201ENST00000449255 495 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 snoU109.4-201ENST00000458953 143 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 RN7SL20P-201ENST00000488827 297 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 OR2A20P-203ENST00000498397 1268 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 KCTD9P5-201ENST00000504141 1170 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC018630.1-201ENST00000541376 925 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 MTND4LP25-201ENST00000570218 163 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC009220.3-201ENST00000604318 586 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC055876.5-201ENST00000605667 259 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC091946.2-201ENST00000606105 291 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AC091046.2-201ENST00000620775 665 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AP003122.6-201ENST00000623831 495 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 GDI2P1-201ENST00000429312 1336 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 AL136520.1-201ENST00000600311 1322 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.12□□□□□ -1.91
RPRD1AQ96P16 SGO1P2-201ENST00000429458 1589 ntBASIC3.12□□□□□ -1.91
RPRD1AQ96P16 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.11□□□□□ -1.91
RPRD1AQ96P16 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RPRD1AQ96P16 AC073325.2-201ENST00000339545 159 ntBASIC3.11□□□□□ -1.91
RPRD1AQ96P16 RNU6-492P-201ENST00000363035 104 ntBASIC3.11□□□□□ -1.91
RPRD1AQ96P16 SNORA14A-201ENST00000364773 135 ntBASIC3.11□□□□□ -1.91
RPRD1AQ96P16 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.11□□□□□ -1.91
RPRD1AQ96P16 RPL7P10-201ENST00000417407 739 ntBASIC3.11□□□□□ -1.91
RPRD1AQ96P16 USP9YP36-201ENST00000424581 829 ntBASIC3.11□□□□□ -1.91
RPRD1AQ96P16 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.11□□□□□ -1.91
RPRD1AQ96P16 RPL35AP12-201ENST00000425362 338 ntBASIC3.11□□□□□ -1.91
RPRD1AQ96P16 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.11□□□□□ -1.91
RPRD1AQ96P16 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.11□□□□□ -1.91
RPRD1AQ96P16 YWHAZP7-201ENST00000436906 631 ntBASIC3.11□□□□□ -1.91
RPRD1AQ96P16 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms