Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AL033528.1-201ENST00000453780 140 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 MTCO3P2-201ENST00000457365 171 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 snoU13.22-201ENST00000459428 104 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 KLF3P2-201ENST00000465138 268 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 TRBV12-2-201ENST00000489763 344 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC023424.2-201ENST00000493479 777 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AL358832.1-201ENST00000497800 389 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC114981.1-201ENST00000503897 678 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 VWA8P1-201ENST00000510889 176 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 RNA5SP216-201ENST00000516111 123 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 NRON-201ENST00000517270 370 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 ZNF519P3-201ENST00000557158 1032 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AL133457.1-201ENST00000564251 987 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC234778.2-201ENST00000566241 354 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AP001180.3-201ENST00000582221 145 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 OR4G1P-201ENST00000588632 938 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 BCRP9-201ENST00000605312 388 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC069200.1-201ENST00000609511 323 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC116447.1-201ENST00000613153 453 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC091834.1-201ENST00000614543 472 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC244258.1-201ENST00000637553 1071 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 AC009229.4-201ENST00000623854 1947 ntBASIC4.32□□□□□ -1.72
CCDC17Q96LX7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC17Q96LX7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 SNORD9-201ENST00000362566 104 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 RNA5SP391-201ENST00000363456 119 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 RNU6-1293P-201ENST00000384077 107 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 Y_RNA.554-201ENST00000384672 102 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 MIR649-201ENST00000384843 97 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 LAP3P1-201ENST00000403648 294 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 USP9YP13-201ENST00000417797 480 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AIMP1P1-201ENST00000418670 937 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC009965.2-201ENST00000425328 970 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AL139415.2-201ENST00000431968 163 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 RBMX2P4-201ENST00000441256 376 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 RPL21P23-201ENST00000446654 460 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 BTF3P5-201ENST00000457252 467 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 RPS15AP17-201ENST00000470598 390 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AP000893.1-201ENST00000474462 794 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC126182.1-201ENST00000478134 357 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 TMED11P-201ENST00000479478 690 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC021678.1-201ENST00000505195 936 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 POU5F1P7-201ENST00000508759 541 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC093809.1-201ENST00000509155 340 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC018797.3-201ENST00000513388 1241 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 MIR4307-201ENST00000582802 84 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 MIR3922-201ENST00000585192 84 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC078899.5-201ENST00000612475 178 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 RNU6-156P-201ENST00000621869 107 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 AC243312.2-201ENST00000623340 601 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 OR5AK4P-201ENST00000635912 903 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 MIR6715B-201ENST00000637172 77 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 U6.101-201ENST00000637707 76 ntBASIC4.31□□□□□ -1.72
CCDC17Q96LX7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC17Q96LX7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms