Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 TAB3P1-202ENST00000452645 1634 ntBASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM5Q96HC4 AC007823.1-201ENST00000569932 1566 ntBASIC3.46□□□□□ -1.85
PDLIM5Q96HC4 AL513185.3-201ENST00000433335 1300 ntBASIC3.46□□□□□ -1.85
PDLIM5Q96HC4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
PDLIM5Q96HC4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC005183.1-201ENST00000603687 1979 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 FAM133CP-201ENST00000332869 704 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 RNU6-157P-201ENST00000383957 107 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 Y_RNA.408-201ENST00000383987 102 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 Y_RNA.465-201ENST00000384293 102 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 SNORD116-8-201ENST00000384365 95 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AL031679.1-201ENST00000400616 525 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 CCDC58P2-201ENST00000417131 366 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AL035423.1-201ENST00000420331 213 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 TMEM167AP1-201ENST00000423409 219 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC233728.2-201ENST00000425348 757 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC007742.1-201ENST00000425789 329 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 CYCSP4-201ENST00000429682 331 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 MTND5P25-201ENST00000430499 799 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 MTND1P32-201ENST00000433043 938 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 ELOCP26-201ENST00000436067 329 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AL008629.1-201ENST00000438615 184 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 RAC1P7-201ENST00000445367 377 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 RPL23AP14-201ENST00000468281 468 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC021205.2-201ENST00000480069 347 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC068587.1-201ENST00000483613 781 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC020893.1-201ENST00000502452 580 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 RN7SKP60-201ENST00000516985 239 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 RNU6-711P-201ENST00000517255 106 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC018638.7-201ENST00000605836 1114 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 SNORA51-201ENST00000606420 132 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC097478.2-201ENST00000610572 514 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC119674.1-207ENST00000641355 633 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 AC012321.1-201ENST00000561622 1588 ntBASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM5Q96HC4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 AL356274.2-201ENST00000624379 3752 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 FRG1BP-201ENST00000278882 761 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 RNU6-28P-201ENST00000362378 107 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 RNU2-43P-201ENST00000410306 190 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 RN7SKP111-201ENST00000410349 271 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 RPL17P36-201ENST00000420302 549 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 TXNL1P1-201ENST00000429528 554 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 ATP5F1P1-201ENST00000433775 569 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 ARPC3P5-201ENST00000448802 534 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 AC234775.1-201ENST00000454247 670 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 AC104090.1-201ENST00000506341 1171 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 CBX3P3-201ENST00000508108 532 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 XKRY-201ENST00000510392 1100 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 RNU6-1129P-201ENST00000515964 104 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 SNORA70.19-201ENST00000516717 90 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 OR5AK1P-201ENST00000524837 922 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 AC087465.1-201ENST00000560574 245 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 AC006116.10-201ENST00000591836 581 ntBASIC3.45□□□□□ -1.86
PDLIM5Q96HC4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms