Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AL513175.2-201ENST00000422071 443 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 VWA8P1-201ENST00000510889 176 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 AC122134.1-201ENST00000565664 1104 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 SNRPGP19-201ENST00000603826 189 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 AC105429.2-201ENST00000610567 517 ntBASIC1.96□□□□□ -2.1
TTC28Q96AY4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.96□□□□□ -2.1
TTC28Q96AY4 SNORA51.12-201ENST00000384448 134 ntBASIC1.95□□□□□ -2.1
TTC28Q96AY4 SNORA68.2-201ENST00000391263 128 ntBASIC1.95□□□□□ -2.1
TTC28Q96AY4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 GOLGA5P1-201ENST00000507317 980 ntBASIC1.95□□□□□ -2.1
TTC28Q96AY4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 AL451049.1-201ENST00000608672 497 ntBASIC1.95□□□□□ -2.1
TTC28Q96AY4 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 RNU6-516P-201ENST00000411381 104 ntBASIC1.95□□□□□ -2.1
TTC28Q96AY4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 AL121877.1-201ENST00000453704 622 ntBASIC1.95□□□□□ -2.1
TTC28Q96AY4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.95□□□□□ -2.1
TTC28Q96AY4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 AL161670.1-201ENST00000554348 137 ntBASIC1.95□□□□□ -2.1
TTC28Q96AY4 AC008015.1-201ENST00000555505 465 ntBASIC1.95□□□□□ -2.1
TTC28Q96AY4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TTC28Q96AY4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.95□□□□□ -2.1
TTC28Q96AY4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TTC28Q96AY4 RPL23AP39-201ENST00000415533 405 ntBASIC1.94□□□□□ -2.1
TTC28Q96AY4 Z99714.1-201ENST00000450463 807 ntBASIC1.94□□□□□ -2.1
TTC28Q96AY4 AL445669.2-201ENST00000454425 421 ntBASIC1.94□□□□□ -2.1
TTC28Q96AY4 AC022634.1-201ENST00000520765 532 ntBASIC1.94□□□□□ -2.1
TTC28Q96AY4 AL035411.2-201ENST00000604022 421 ntBASIC1.94□□□□□ -2.1
TTC28Q96AY4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.94□□□□□ -2.1
TTC28Q96AY4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.94□□□□□ -2.1
TTC28Q96AY4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TTC28Q96AY4 AC093831.2-201ENST00000624393 3427 ntBASIC1.94□□□□□ -2.1
TTC28Q96AY4 AC009501.3-201ENST00000605001 1352 ntBASIC1.94□□□□□ -2.1
TTC28Q96AY4 AC103988.1-201ENST00000566382 2177 ntBASIC1.94□□□□□ -2.1
TTC28Q96AY4 MTCO1P7-201ENST00000419523 1542 ntBASIC1.94□□□□□ -2.1
TTC28Q96AY4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.94□□□□□ -2.1
TTC28Q96AY4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TTC28Q96AY4 AF186190.1-201ENST00000517470 480 ntBASIC1.94□□□□□ -2.1
TTC28Q96AY4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.94□□□□□ -2.1
TTC28Q96AY4 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.94□□□□□ -2.1
TTC28Q96AY4 AL353748.2-201ENST00000622148 471 ntBASIC1.94□□□□□ -2.1
TTC28Q96AY4 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TTC28Q96AY4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC1.93□□□□□ -2.1
TTC28Q96AY4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TTC28Q96AY4 RNU6-37P-201ENST00000362692 107 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 RNU6-11P-201ENST00000364234 107 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 DEFB109C-201ENST00000382575 264 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 DEFB109B-201ENST00000382656 264 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 AC008173.1-201ENST00000418901 264 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.93□□□□□ -2.1
TTC28Q96AY4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.93□□□□□ -2.1
TTC28Q96AY4 RPL23AP20-201ENST00000447965 421 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 AC125238.1-201ENST00000448842 249 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 RNU6-964P-201ENST00000516524 69 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.93□□□□□ -2.1
TTC28Q96AY4 AC016957.1-201ENST00000534895 309 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC1.93□□□□□ -2.1
TTC28Q96AY4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC1.93□□□□□ -2.1
TTC28Q96AY4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TTC28Q96AY4 DNAJC19P6-201ENST00000401853 280 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 RNA5SP296-201ENST00000410523 111 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.93□□□□□ -2.1
TTC28Q96AY4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.93□□□□□ -2.1
TTC28Q96AY4 AC108734.3-201ENST00000481241 1165 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.93□□□□□ -2.1
TTC28Q96AY4 SNORA25.15-201ENST00000516487 89 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TTC28Q96AY4 RPL23AP61-201ENST00000623642 466 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
TTC28Q96AY4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.93□□□□□ -2.1
TTC28Q96AY4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
TTC28Q96AY4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TTC28Q96AY4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
TTC28Q96AY4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.92□□□□□ -2.1
TTC28Q96AY4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TTC28Q96AY4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TTC28Q96AY4 RHEBP3-201ENST00000411920 351 ntBASIC1.92□□□□□ -2.1
TTC28Q96AY4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.92□□□□□ -2.1
TTC28Q96AY4 RPS29P1-201ENST00000465274 159 ntBASIC1.92□□□□□ -2.1
TTC28Q96AY4 AP000889.2-201ENST00000532684 490 ntBASIC1.92□□□□□ -2.1
TTC28Q96AY4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.92□□□□□ -2.1
TTC28Q96AY4 SULT1C2P1-202ENST00000562418 459 ntBASIC1.92□□□□□ -2.1
TTC28Q96AY4 AC011712.1-201ENST00000588959 234 ntBASIC1.92□□□□□ -2.1
TTC28Q96AY4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.92□□□□□ -2.1
TTC28Q96AY4 AC068790.3-201ENST00000602988 553 ntBASIC1.92□□□□□ -2.1
TTC28Q96AY4 MIR6767-201ENST00000637302 66 ntBASIC1.92□□□□□ -2.1
TTC28Q96AY4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms