Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.91□□□□□ -2.1
SPTSSAQ969W0 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AC069306.1-201ENST00000507006 843 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 RNU1-103P-201ENST00000516502 125 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 RPPH1-2P-201ENST00000516688 293 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AP003122.3-201ENST00000526316 255 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AP003385.6-201ENST00000531603 374 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AC012182.1-201ENST00000570133 895 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AC009163.5-201ENST00000575421 637 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 COX6CP3-201ENST00000580869 223 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 MIR5194-201ENST00000582634 120 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AC107294.1-201ENST00000609524 467 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AC140725.3-201ENST00000616193 880 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AC093591.3-201ENST00000634516 308 ntBASIC1.91□□□□□ -2.1
SPTSSAQ969W0 AC244517.1-201ENST00000606030 2086 ntBASIC1.9□□□□□ -2.1
SPTSSAQ969W0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SPTSSAQ969W0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
SPTSSAQ969W0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SPTSSAQ969W0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.9□□□□□ -2.1
SPTSSAQ969W0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 ZNF720P1-201ENST00000562403 1939 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 Y_RNA.510-201ENST00000384511 114 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 SNORA80E-201ENST00000384744 137 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 BTF3P7-201ENST00000407097 488 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 RNU2-25P-201ENST00000411041 191 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AL513477.1-202ENST00000417061 214 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AC005005.2-201ENST00000420779 380 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 Z99127.2-201ENST00000441426 334 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 OR6C72P-201ENST00000451403 892 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 MTCYBP14-201ENST00000457471 715 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 MTND3P24-201ENST00000506306 329 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AC034244.2-201ENST00000514668 858 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 RN7SKP283-201ENST00000517197 270 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 RN7SKP40-201ENST00000517211 242 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AP002770.2-201ENST00000543613 532 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AC074029.1-201ENST00000552531 1044 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 SNRPGP18-201ENST00000553000 214 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 MTCO3P22-201ENST00000603219 784 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 U73479.1-201ENST00000618062 168 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 MIR6873-201ENST00000622788 63 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.9□□□□□ -2.11
SPTSSAQ969W0 AC026241.1-201ENST00000517873 2142 ntBASIC1.9□□□□□ -2.11
SPTSSAQ969W0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 RNA5SP289-201ENST00000362332 137 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 MIR144-201ENST00000384886 86 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 MIR634-201ENST00000385208 97 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 RNU4-53P-201ENST00000410828 140 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AL031183.1-201ENST00000457667 207 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 HSPE1P6-201ENST00000479457 291 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 RPL37P25-201ENST00000507308 276 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AC105914.1-201ENST00000511798 226 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AC016065.2-201ENST00000514530 444 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 RNU6-1004P-201ENST00000516584 111 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 SNORA31.20-201ENST00000517111 133 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 IGKV2-36-201ENST00000519999 223 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AC027309.2-201ENST00000520566 192 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AC009063.1-201ENST00000563342 702 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 MIR548Y-201ENST00000582739 110 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AL049779.4-201ENST00000604500 156 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 PABPC1P7-201ENST00000413177 1513 ntBASIC1.89□□□□□ -2.11
SPTSSAQ969W0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
SPTSSAQ969W0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.88□□□□□ -2.11
SPTSSAQ969W0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SPTSSAQ969W0 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.88□□□□□ -2.11
SPTSSAQ969W0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPTSSAQ969W0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms