Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 COX6B1P7-201ENST00000430845 235 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 MTCO2P11-201ENST00000431069 680 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AL358472.1-201ENST00000431295 329 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC002486.1-201ENST00000435098 391 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 VN1R34P-201ENST00000447387 883 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 MTND2P24-201ENST00000453434 806 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 RPS29P22-201ENST00000472363 168 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 RPL23AP41-201ENST00000484754 458 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC007182.2-201ENST00000489251 402 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC105914.1-201ENST00000511798 226 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 Vault.3-201ENST00000516676 95 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AK6P1-201ENST00000540219 478 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AL356432.3-201ENST00000568952 465 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC099489.2-201ENST00000574976 260 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC012417.1-201ENST00000582307 1039 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 MIR98-201ENST00000606724 119 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC004067.1-201ENST00000608733 700 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AL355472.4-201ENST00000610233 626 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AL133173.2-201ENST00000614270 90 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AP000346.3-201ENST00000622821 210 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 AC019226.1-201ENST00000625666 515 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 LRRC77P-213ENST00000637727 880 ntBASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
ATG4AQ8WYN0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
ATG4AQ8WYN0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
ATG4AQ8WYN0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 RNU5E-1-201ENST00000362477 120 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 U3.20-201ENST00000390909 217 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 U3.29-201ENST00000391296 212 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 MTND4LP20-201ENST00000402379 270 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 Y_RNA.625-201ENST00000411256 107 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC127526.1-201ENST00000417526 366 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 MTCO3P18-201ENST00000440206 761 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AL136380.1-201ENST00000447970 162 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC132479.1-201ENST00000449160 144 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AL121877.1-201ENST00000453704 622 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 MTND1P12-201ENST00000455231 147 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 RNA5SP246-201ENST00000458909 119 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 RPS4XP10-201ENST00000465034 731 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC011276.1-201ENST00000469688 323 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 RN7SL481P-201ENST00000477764 299 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC021382.1-201ENST00000483523 359 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 MTCO3P44-201ENST00000510977 541 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 SETP2-201ENST00000553886 926 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AL157687.1-201ENST00000554853 619 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 MIR3118-1-201ENST00000581787 76 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 UBE2L4-201ENST00000587688 464 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC008277.2-201ENST00000605196 797 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AL357078.3-201ENST00000607528 618 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 MIR7151-201ENST00000617477 60 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AL158801.5-201ENST00000623123 465 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC091953.2-201ENST00000623979 160 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 AC099654.14-201ENST00000638599 341 ntBASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
ATG4AQ8WYN0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms