Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC009310.1-201ENST00000414414 451 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 BX295541.1-201ENST00000417774 250 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 SNRPEP10-201ENST00000420249 274 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 RPS27AP14-201ENST00000422868 454 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 Z93242.1-201ENST00000427102 353 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 RPL7P2-201ENST00000427639 268 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC073335.1-201ENST00000427776 363 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 BX890604.2-201ENST00000427883 474 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AL358472.1-201ENST00000431295 329 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC009961.2-201ENST00000435771 251 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC079448.1-201ENST00000449377 373 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 RN7SL817P-201ENST00000480777 288 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 SETP14-201ENST00000497538 873 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC108078.3-201ENST00000502633 489 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 KCTD9P5-201ENST00000504141 1170 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC025260.1-201ENST00000548858 430 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC063950.1-201ENST00000552036 308 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC037471.2-201ENST00000564941 598 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 MIR5684-201ENST00000585074 65 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 VN1R107P-201ENST00000601784 209 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AL390838.2-201ENST00000602394 274 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC105429.2-201ENST00000610567 517 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 AC108479.2-201ENST00000617314 601 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 STMN1P1-201ENST00000617809 440 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 MIR6500-201ENST00000622700 86 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 C2orf27A-204ENST00000623058 969 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 CR392039.4-201ENST00000624968 501 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 ZNF37BP-203ENST00000452306 1352 ntBASIC4.9□□□□□ -1.63
SH3RF3Q8TEJ3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 RNF6P1-201ENST00000444889 1784 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 RNU1-15P-201ENST00000353977 144 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 RN7SKP58-201ENST00000411010 305 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AL691449.1-201ENST00000426570 421 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC024082.2-201ENST00000434771 238 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AL831737.1-201ENST00000441288 271 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 SNORA84-201ENST00000459229 133 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 RN7SL542P-201ENST00000467147 294 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC093278.1-201ENST00000494700 600 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AF131216.2-201ENST00000512316 564 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 RNU6-1281P-201ENST00000516223 105 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 IFITM8P-201ENST00000522529 394 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 HSPA8P13-201ENST00000523715 472 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC022878.1-201ENST00000530684 149 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC100770.1-201ENST00000532310 322 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC011611.1-201ENST00000552179 197 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC090312.1-201ENST00000580637 348 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 MIR3171-201ENST00000584270 74 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC018638.8-201ENST00000588755 281 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 BNIP3P23-201ENST00000599655 511 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC006006.1-201ENST00000603082 144 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AL596327.1-201ENST00000603629 213 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC112191.3-201ENST00000604371 277 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 MIR6868-201ENST00000611215 58 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC064801.1-201ENST00000612025 407 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AL603758.1-201ENST00000618654 241 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 AC005858.4-201ENST00000623191 700 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 Z82217.1-201ENST00000625157 8149 ntBASIC4.89□□□□□ -1.63
SH3RF3Q8TEJ3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF3Q8TEJ3 ERCC6-202ENST00000374127 1782 ntBASIC4.88□□□□□ -1.63
SH3RF3Q8TEJ3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF3Q8TEJ3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.88□□□□□ -1.63
SH3RF3Q8TEJ3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF3Q8TEJ3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SH3RF3Q8TEJ3 AC105074.1-201ENST00000623380 3095 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms