Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 FTLP19-201ENST00000433300 394 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 RPL7AP61-201ENST00000443410 636 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 MTND6P5-201ENST00000448266 512 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 RN7SL319P-201ENST00000480656 221 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 AC022493.2-201ENST00000506122 481 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 AC116337.1-201ENST00000509680 687 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 Y_RNA.708-201ENST00000516950 96 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 AC012339.2-201ENST00000523996 453 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 FAM25E-202ENST00000608562 189 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 OR6R2P-201ENST00000609216 300 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 PISRT1.1-201ENST00000616930 107 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 AP001784.1-201ENST00000624107 428 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 AL138820.1-201ENST00000617901 5305 ntBASIC5.9□□□□□ -1.46
NEDD1Q8NHV4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.9□□□□□ -1.47
NEDD1Q8NHV4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.9□□□□□ -1.47
NEDD1Q8NHV4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NEDD1Q8NHV4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
NEDD1Q8NHV4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
NEDD1Q8NHV4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
NEDD1Q8NHV4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.9□□□□□ -1.47
NEDD1Q8NHV4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NEDD1Q8NHV4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
NEDD1Q8NHV4 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 SNORA62.1-201ENST00000364287 154 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 Y_RNA.276-201ENST00000364732 109 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 Y_RNA.297-201ENST00000364950 91 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 RNU6-1027P-201ENST00000383998 107 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 U3.32-201ENST00000408116 212 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 Y_RNA.594-201ENST00000410373 140 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 RNU2-29P-201ENST00000410423 189 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 AL354766.1-201ENST00000423396 542 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 RBMY1KP-201ENST00000423480 476 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 MRPS18CP6-201ENST00000423587 223 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 RPS7P5-201ENST00000441482 581 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 HMGB1P4-201ENST00000455362 567 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 AC091180.1-201ENST00000462104 372 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 RPS23P3-201ENST00000470993 430 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 MTND4P7-201ENST00000523876 130 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 AP002770.2-201ENST00000543613 532 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 NDUFB4P11-201ENST00000560510 395 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 AC018552.3-201ENST00000567416 561 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 MIR3146-201ENST00000580367 79 ntBASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
NEDD1Q8NHV4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 SCARNA15-201ENST00000607520 4325 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AL442639.1-201ENST00000625030 1899 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 OR56A5-201ENST00000340110 738 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 RNU6-212P-201ENST00000362642 104 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 RNU6-1029P-201ENST00000384109 107 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 RNU6-493P-201ENST00000391321 108 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 EIF4E2P1-201ENST00000393781 255 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 COX5BP7-201ENST00000414780 274 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 REREP1Y-201ENST00000422655 198 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 REREP2Y-201ENST00000439103 200 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AL450023.3-201ENST00000440592 271 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AC112498.1-201ENST00000444401 332 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 CBX1P2-201ENST00000453841 458 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AP001025.2-201ENST00000490908 477 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AC034222.1-201ENST00000494052 532 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 RNU5B-3P-201ENST00000516601 115 ntBASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.88□□□□□ -1.47
NEDD1Q8NHV4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms